Dechloromonas denitrificans: KI615_10580
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Entry
KI615_10580 CDS
T08301
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dden
Dechloromonas denitrificans
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dden03400
]
KI615_10580
DNA repair and recombination proteins [BR:
dden03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KI615_10580
Archaeal homologous recombinant proteins
KI615_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
AAA_15
cobW
RsgA_GTPase
nSTAND3
NTPase_1
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
UCV09922
LinkDB
All DBs
Position
complement(2226240..2229704)
Genome browser
AA seq
1154 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWTIDFTKPPFTDNCLFAITGPTGAGKSTLLDAICLALYHQTPR
LKTISASDNDIMTRHTADCLAEVEFEVKGAVYRAFWSQRRSRDKIDGALQAPKVELAAGD
GTILSTQTNDKLKRIAEITGLDFPRFTKSMLLAQGGFAAFLNASANERAELLEELTGTEI
YGEISRKVFEQARDAKNQLDQLKARAEGMELLADEQRAAMQVEVGRLDTQLADVQRRHQQ
TQSQRQWRLDLAQGEQEVKTAESKLLQADAALTAAAPDLKKLADSEPAEALKPLHLQWQQ
AGAACQHSENELKALHAAREKLQAEQLARHRAARQFSAQVAELTRQALQQSQREAKQLDD
FCAAQPHRAQLGERLGVWRQQFEQRAKLVRDLAAQQQAQQKLADELAATARQLTTQATTV
DSAEKTKTAADSALEKIQAEQNQRLAGQTLGELRQHWQREQTGLNRWQQLEALAQRRREL
AALQTTQATQMQQVQEKIAALEKKLIALRETHKELAAQVADKKKLLEQEQRIRSLEQHRH
QLQPGEACPLCGAHEHPAIADYAALDVSTTESALKEKQAALDALVETGQQARNDQTAALT
TQKALLDQQAKTTEDSARLQTEWAALLASLTSEPQLTVDTWQQAETLAAARATAEQAVAR
LAQRLQAADQGEQTLNAARKSAADSAQALLNAGNQQKLLQQTAEVGQLRQAELAKTGQLI
AQEQAELDGKLAATLAAAGYEIPTEPATWLQERDGDWQHWQQTQKRRHELAEILVKQQDR
FDVAQTQAMQWLERWQTLAAERPTALEGDETGAITDDPAAALAHSGEAIADLTQQLAAQQ
GRQAQLEANLAQQNKALAEASIAWQTALAASPFADLAAYGAALLPADERQRLLQLKEARH
LAKQQAEAVLKAAGEKLLRLQTAPPRDSVEIAVPPLPELDAALALLETTRRELSEQLGAQ
RALLTRDEQARQNQQALFKEIAAQTAESDLWQRLDSLIGSARGDKFRKFAQGLTLDHLLH
LANSHLARLHGRYLLRRKSTGELELDIVDSWQGEVARDTRTLSGGESFLVSLALALALSD
LVSHKTSIDSLFLDEGFGTLDADTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQIR
VEKGGGVGYSRLRI
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgcgcctgaagaacctcaattcgctgaagggcgaatggaccatc
gacttcaccaagccaccgttcaccgacaactgcctgttcgccatcaccggcccgaccggc
gccggcaaatcgacgctgctcgatgccatctgcctcgccctctaccaccagacgccgcgc
ctgaagaccatttcggcctcggataacgacatcatgacgcggcacaccgccgactgcctg
gccgaggtcgagtttgaagtgaaaggcgccgtctaccgcgccttctggagccagcgccgc
tcgcgcgacaagatcgatggcgcgctgcaggcgcccaaggtcgaactggccgccggcgac
ggcaccatcctcagcacgcagaccaacgacaaactgaagcgcatcgccgaaatcaccggc
ctcgacttcccgcgcttcaccaaatcgatgttgcttgcccagggcggcttcgcggccttc
ctcaacgccagcgccaacgaacgggcggagctgctggaagaactgaccggcaccgaaatc
tacggcgagatttcccgcaaggtttttgagcaggcgcgcgatgccaagaaccagctcgac
cagctcaaagcccgcgccgaaggcatggaactactggccgacgaacaacgcgccgcgatg
caagtcgaagtcggccgcctcgatacgcaactcgccgacgtccagcgccgccatcagcag
acgcaaagccagcgtcaatggcgcctcgacctggcgcagggcgagcaggaagtcaaaacc
gccgaaagcaagctgctgcaagccgatgccgcgctgactgcggccgcgccggacctgaaa
aaactcgccgacagcgaaccggccgaagccctgaagccgctgcacctgcaatggcaacag
gccggcgccgcctgccagcatagcgaaaacgaactcaaggcgctgcacgccgcccgcgaa
aagctgcaagccgaacagctcgcccggcaccgggccgcccgccagttcagcgcgcaggtc
gccgagctaacccggcaagccctgcaacaaagccagcgcgaggccaagcaactcgacgac
ttctgcgccgcccagccgcaccgcgcccagctcggcgaacgtctcggcgtctggcgtcag
cagttcgaacagcgggccaaactggttcgcgacctcgctgcccagcagcaggcgcagcaa
aagctggccgatgaactcgccgccaccgcccgccagctaaccacgcaggccacaacggtc
gacagcgcagaaaagaccaaaaccgccgccgacagcgcactggaaaaaattcaggccgaa
cagaaccagcgcctggccggccagacgctgggcgaactgcgccagcactggcaacgcgaa
cagaccggcctcaaccgctggcagcaactagaagcgctcgcccagcgccggcgcgaactg
gccgcgctgcaaaccacgcaggcgacgcaaatgcagcaggttcaggaaaagatcgccgcg
ctcgaaaaaaagctgatcgccctgcgcgagacacacaaggaacttgccgcccaggttgcc
gacaagaaaaagctgctcgaacaggaacagcgtatccgcagcctggagcaacatcgccat
caactgcagccgggcgaggcctgcccgctgtgtggcgcgcacgaacacccggcgattgcc
gactacgctgccctcgacgtttccacgaccgaaagcgccctcaaggaaaagcaggcagcg
ctcgacgcactggtggaaaccggccaacaagcccgcaacgaccaaaccgccgccctgaca
acacaaaaggctttgctggatcagcaggccaagacaacggaggacagcgcccgcctgcaa
acggaatgggcagcgctgcttgccagcctgaccagcgaaccgcaactcacggtcgacacc
tggcaacaggccgaaaccctggccgccgcccgcgccactgccgagcaggcggtggcccgc
ctcgcccaacgcctgcaagccgccgaccagggcgaacagacgctgaacgccgcccgcaag
agcgccgccgacagcgcccaagcgctactcaacgccggcaaccagcagaagctgctgcaa
cagacggcggaagttgggcaactacgccaggccgaactcgccaaaaccgggcagctcatc
gcccaggaacaggccgaactcgacggcaagctggccgcaacactggccgccgccggttac
gaaatccccactgaacccgccacctggttgcaggaacgtgatggtgactggcaacactgg
cagcaaacccagaagcgtcgccacgaactggccgaaattctggtcaagcagcaggaccgc
tttgacgtcgcgcagacgcaggccatgcaatggctggaacgctggcaaacgctcgctgcc
gagcggccgactgcgctggaaggtgacgagaccggcgcgatcaccgacgacccggccgcc
gccctcgcccacagtggcgaagccatcgccgacctgacccagcaactcgccgcgcaacaa
ggccggcaggcgcaactcgaagccaatctcgcccaacagaacaaggccctcgccgaggcc
tcgatcgcctggcagacggcgctcgccgccagccccttcgccgacctcgccgcctacggc
gcggcgctgctgccggccgacgaacgccagcgcctgctgcaattgaaggaggcccggcac
ctcgccaaacagcaggccgaggccgtgctcaaggctgccggcgaaaagctgctgcgcctg
caaaccgcgccgccacgcgattcagtcgaaattgccgtcccgccgctccccgaactcgac
gccgccctcgccctactggaaaccactcgccgcgaactcagcgaacaactcggcgcccag
cgcgccctgctcacccgtgacgaacaggcgcggcagaaccagcaggcgctgttcaaggaa
atcgccgcgcagaccgccgaaagcgacctctggcaacgcctcgacagcctgatcggctcg
gcgcgtggcgacaagttccgcaaattcgcccagggcctgactctcgaccacctgctgcac
ctcgccaacagccacctcgcccgcctgcacggccgctacctgctgcgccgcaaaagcacc
ggcgaactcgaactcgatatcgtcgacagctggcagggcgaagtcgcccgcgacacccgc
accctgtccggcggcgaaagcttcctggtcagcctggccctcgccctcgccctctccgac
ctggtcagccacaagaccagcatcgactcgctcttcctcgacgaaggcttcggcaccctc
gacgccgacaccctggaaatcgccctcaatgccctcgacaccctgaacgccagcggcaag
atgatcggcgtcatcagccacgtcgaaggcatgaaggaaaggattccggcgcagatccgg
gtggaaaaaggcggcggcgttgggtattcgcggttgaggatttag
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