Dechloromonas denitrificans: KI615_14145
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Entry
KI615_14145 CDS
T08301
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KI615_14145 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dden03019
]
KI615_14145 (orn)
03009 Ribosome biogenesis [BR:
dden03009
]
KI615_14145 (orn)
Messenger RNA biogenesis [BR:
dden03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KI615_14145 (orn)
Ribosome biogenesis [BR:
dden03009
]
Eukaryotic type
Pre-60S particles
RNases
KI615_14145 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
pP_pnuc_1
CTD1
Motif
Other DBs
NCBI-ProteinID:
UCV06543
LinkDB
All DBs
Position
complement(2966264..2966809)
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AA seq
181 aa
AA seq
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MAGNANNLVWLDMEMTGLNPDGDRIIEMAMVVTNSELELVAESPAWVVHQSDEVLAGMDE
WNQKTHGRSGLIDKVKASLLSEAEVEVAALEFLKKYSSTGHSPMCGNSIGQDRRFMARYM
PTLETFFHYRNLDVSTLKELCKRWQPEIYKGFKKKGRHTALADIYESIDELKYYREHFLK
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcaacgcaaacaacctcgtctggctggatatggaaatgaccggtttgaacccg
gatggcgaccgcattatcgaaatggccatggtagtgaccaattcggagctcgagttggtt
gccgaatcgccagcctgggtcgtccatcagtcggacgaagtgctggctggcatggacgag
tggaaccagaaaacccacggccgttcggggctgatcgacaaggtcaaggcttcgctgctc
agcgaggcggaagtcgaggtcgccgcgctcgagttcctgaagaaatattcgtccaccggc
cactcgccgatgtgcggcaattcgatcggccaggaccgccgcttcatggcgcgctacatg
ccgacgctggaaactttcttccactaccggaatctcgatgtcagtacgctgaaggagttg
tgcaagcgctggcagccggaaatctacaagggtttcaagaaaaagggccggcatacggcg
ctcgccgatatctacgaatcgatcgatgagctcaagtattaccgcgaacatttcctgaag
ggctga
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