Dechloromonas denitrificans: KI615_18380
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Entry
KI615_18380 CDS
T08301
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dden
Dechloromonas denitrificans
Pathway
dden03030
DNA replication
dden03430
Mismatch repair
dden03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dden00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KI615_18380 (dnaE)
03430 Mismatch repair
KI615_18380 (dnaE)
03440 Homologous recombination
KI615_18380 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dden03032
]
KI615_18380 (dnaE)
03400 DNA repair and recombination proteins [BR:
dden03400
]
KI615_18380 (dnaE)
Enzymes [BR:
dden01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KI615_18380 (dnaE)
DNA replication proteins [BR:
dden03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KI615_18380 (dnaE)
DNA repair and recombination proteins [BR:
dden03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KI615_18380 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UCV07340
LinkDB
All DBs
Position
complement(3892835..3896299)
Genome browser
AA seq
1154 aa
AA seq
DB search
MPPMNPPRYVHLRLHSEYSVTDGIVRLGDAVKRAAGDGMPAMALTDLGNLFGLVKFYSGA
RGKGVKPVAGADVWIANPESPDDAYRLLLLVRNRAGYQQLCELLSKAYLVEGRRDRAELR
REWFTELGCDGLIALSGAHLGDVGEALINGNFDLAGERAKAWEAIFPGAFYLEVQRYGQP
QQEAIVQQTADLAGETGIPLVATHPIQFMNRDDFRAHEARVCIAEGYVLGDTRRPKIYTE
EQYFKTQDEMVALFADLPEALENSLEIAKRCNIELTLGKNFLPNFPIPPGMTIDEFLVDE
AEKGLEVRLAELYPDPEERLKRRPEYDARLVFECNTIVQMGFPGYFLIVADFIKWAKANG
VPVGPGRGSGAGSLVAYSLLITDLDPLAYALLFERFLNPERVSMPDFDVDFCQDNRWRVI
EYVRQHYGEDAVSQIATFGTMSSKAVIRDVGRVFGLPYSMCDRISKLIPIVQNKPVSLAE
ALEQEPQLREMMEGDGDGETIRELFDLASRLEDLTRNVGMHAGGVLIAPGKITEFCPIYQ
ATGSDASTVSQFDKDDVEKVGLVKFDFLGLRNLTIIELAVEYIRRMTGEKLDLMSLGFTD
PAAYQILKDANTTAIFQVESEGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSGMVDDFIL
RKKGQQKIDYFHPDLTACLSPTYGVIVYQEQVMQISQIIGGYTLGGADMLRRAMGKKKPE
EMAKHRETIAAGAKEKGYDPALAEQLFDLMTKFAEYGFNKSHTAAYAVVTYHTAWLKAHH
CAAFMAATMSSDMDNTDSVKIFYEDAVGSANKLKMLGPDVNASNYRFEPVDRATIRYGLG
AVKGTGEQAVNDILRARDAGGPFKDLFDFCQRCDKRMVNRRTTEALIKAGAFDCIDADRH
KLLASVGIAMEFADQAERNAMQSSLFDIGNVAEDHAPQYVTVKRWDEKEQLMQEKTALGF
FFSGHPYNTCKKELSRFVRRPLNQLQPAKELTTLAGVVVGVRTQMTRRGKMLFVQLDDGT
GMIEVTVFNELFEAERAKIVTDEVLVIEGKVRFDEFSGSNSVTADKLMTLGEARARFARY
LLLKMNGNSDARRLKSLLTPFAPGPAAVRIRYRNETAECEIVLGEAARVRLDDALLEALN
GWLQPENVEVVYNV
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccatgaatcccccgcgctacgtccacctccgcctccattccgaatactctgtg
actgacggcatcgtccgcctcggcgacgccgtcaagcgggccgctggcgacggcatgccg
gcgatggccctgaccgatctcggcaacctgttcggcctggtcaagttctattccggagcg
cgcggcaagggcgtcaagccggtggccggggcggatgtctggatcgccaacccggaatcg
cccgacgacgcctatcgcctgttgctactggtgcgtaaccgggccggttaccagcaattg
tgcgaactgctgagcaaggcttacctggtcgaggggcggcgggatcgcgccgaactccgc
cgcgaatggttcaccgagctcggctgcgacggcctgatcgcgctgtccggggcgcatctc
ggcgatgtcggcgaagccctgatcaacggcaatttcgatctggccggcgagcgtgccaag
gcctgggaagcgattttccccggcgccttctacctcgaagtgcagcgctacggccagccg
cagcaggaagccatcgtccagcagacggccgatctggccggcgagacgggcattccgctg
gtcgcgacgcacccgatccagttcatgaaccgcgacgacttccgggcgcacgaagcccgt
gtctgcatcgccgaaggctatgtgctgggcgatacgcggcggccgaaaatctataccgag
gaacagtatttcaagacccaggacgaaatggtcgcgctgttcgccgacctgccggaagcg
ctggaaaactcgctggaaatcgccaagcgctgcaatatcgaactgacgctgggcaagaac
ttcctgcccaacttcccgattccgccgggcatgaccattgacgaattcctcgtcgatgaa
gcggagaagggcctggaagtccgtctggcggagttgtacccggaccccgaggagcgcctg
aaacgccggccggaatacgacgcgcggctggtcttcgagtgcaacaccatcgtccagatg
ggcttccccggctacttcctgatcgtggccgacttcatcaagtgggccaaggccaacggc
gtgccggtcgggccgggccggggttccggggccggttcgctggtcgcctacagcctgctg
attaccgaccttgatccgctggcctacgcgctgctcttcgaacggttcctgaacccggaa
cgggtctcgatgcccgacttcgacgtcgacttctgccaggacaaccgctggcgcgtcatc
gaatacgtccgccagcactacggcgaggacgcggtcagccagatcgccaccttcggtacg
atgtcctcgaaggcggtgatccgcgacgtcggccgggtgttcggcctgccttactcgatg
tgcgaccgcatttccaagctcatcccgatcgttcagaacaagccggtgtcgctggccgag
gcgctcgagcaggagccgcagctgcgcgagatgatggaaggcgacggcgacggcgaaacc
attcgcgaactgttcgacctggccagccggctggaggacttgacgcgcaatgtcggcatg
cacgccggcggcgtgctcattgcaccgggcaagatcaccgagttctgcccgatctaccag
gcgaccggcagcgatgcgtccacggtgtcgcagttcgacaaggacgacgtcgagaaggtc
ggactggtcaagttcgactttctgggcctgcgcaacctgacgattatcgagctggccgtc
gagtacatccgccggatgaccggcgaaaagctcgacctgatgagcctcggtttcaccgac
ccggccgcctaccagatcctgaaagacgccaatacgacggcgatcttccaggttgaatcg
gagggcatgaagaagctgttgaagaagctggcgcccgaccgttttgaagacatcatcgct
gtgctcgccctctaccggccgggcccactcggctccggcatggtcgacgacttcatcctg
cgcaagaagggccagcagaagatcgattatttccaccccgacctgaccgcctgcctgtcg
ccgacctacggcgtgatcgtgtaccaggaacaggtgatgcagatttcgcagatcatcggc
ggctacacgctgggcggcgccgacatgctgcgtcgggcgatgggcaagaagaagcccgag
gaaatggccaagcaccgcgagaccatcgccgccggtgccaaggaaaagggctacgatccg
gcgctcgccgagcagttgttcgacctgatgaccaagttcgcggaatacggcttcaacaag
tcgcacaccgccgcctacgccgtcgtcacctatcacaccgcctggctcaaggcgcaccac
tgcgcggccttcatggcggcgaccatgtcctccgacatggacaacaccgactcggtgaag
atcttctatgaagatgcggtggggtctgccaacaagctcaagatgctcgggccggacgtc
aatgcctcgaattaccgtttcgagccggtcgaccgcgccaccatccgttacggcctgggg
gcggtcaagggcaccggcgagcaggcggtcaatgacatcctgcgggcgcgcgatgccggc
ggcccgttcaaggatctgttcgatttctgccagcgctgcgacaagcggatggtcaatcgc
cgcaccaccgaggcgctgatcaaggccggtgcctttgactgcatcgatgccgatcgccac
aagctgctcgcctcggtcggcatcgccatggaattcgccgatcaggccgagcgcaatgca
atgcagtcgagtctgttcgatatcggcaacgtcgccgaagatcatgcgccgcaatatgtc
acggtcaagcgctgggacgagaaggaacagctgatgcaggagaagacggcgcttggcttc
ttcttctccggccacccctacaacacttgcaagaaggagctgtcgcgcttcgttcgccgg
ccgctcaaccagttgcagccggccaaggaactgacgacgctggccggcgtcgtggtcggc
gtgcgcacccagatgacccggcgcggcaagatgctcttcgtccagctcgatgacggtacc
gggatgatcgaggtcaccgtcttcaacgaactgttcgaggccgaacgcgccaagatcgtc
accgacgaggtgctggtcatcgaaggcaaggtcaggttcgacgagttttcgggcagcaac
agcgtcaccgccgacaagctgatgacgctgggcgaggcgcgcgcccgttttgcccgctat
ctgctgctcaagatgaacggcaattccgatgctcgcaggctgaagagcctgctgacgcct
ttcgcgccggggccggcggcagtgcggattcgctaccgcaacgagacggccgagtgcgaa
atcgtgctcggtgaagcggcccgcgtcaggctcgacgacgccttgctcgaagcgctgaac
ggctggttgcagccggaaaatgtcgaggttgtgtacaacgtctag
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