Deferribacter desulfuricans: DEFDS_0002
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Entry
DEFDS_0002 CDS
T01188
Name
(GenBank) conserved hypothetical protein
KO
K03629
DNA replication and repair protein RecF
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEFDS_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_0002
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DEFDS_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
AAA_15
DUF2813
ABC_tran
nSTAND3
MobB
AAA_22
RNA_helicase
NACHT
AAA
DevT_C
AAA_19
nSTAND_NTPase5
AAA_16
DO-GTPase2
FtsK_SpoIIIE
RsgA_GTPase
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
BAI79514
UniProt:
D3PA91
LinkDB
All DBs
Position
1244..2245
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AA seq
333 aa
AA seq
DB search
MFLDELKIVNVRNIEHLSIKFDHKRNYIIGENGSGKTTILESIVTSLYRKSFRTSKIEEL
KSINSPFLSISSIFIKNGLNYTFTFNYSDKKKLHLINNKKIDKLLNIISHFPLIVHSPYY
EGLTDKSNRNKLTFLDKIVILADKSYKENLSKFNKLLKHKRKLITESNDTKLINTINDLL
SEIYELIYKKRKNFLEQLNMRLKDYESTKKISIELKKNKTKDVFLNELALKKILLTQYSQ
KIYITSENKNIENLLSFGQKKELSIFIIYSFLKIIEEIIKDGIIILLDDFEAGLDESKVK
NFYEIFSDNQLILTGVDNKYLSGINTICLKGVK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtttttagatgaactaaaaattgtgaatgtcagaaatatagaacatttaagcattaaa
tttgaccataaaagaaactatataataggcgaaaatggttccggcaaaacaactatctta
gaatcgatagtaacatcattatacagaaaaagctttagaacgagcaaaatagaggaacta
aaaagcataaatagcccttttttatccatatctagtattttcatcaaaaatggattaaac
tacacattcacatttaactattctgataaaaaaaaactacatttaattaacaataaaaag
atagataagttactgaacataatatctcattttcctttaattgttcattcaccatattac
gaaggtttaacagataaaagcaacaggaataaactcacatttctagacaaaatagtcata
ttagcggataaatcttataaagaaaatttatctaaattcaacaaacttttaaaacataaa
agaaaattaataactgagagcaatgatacaaaactgattaacacaataaatgatctatta
tccgaaatctatgaacttatttataaaaaaagaaagaattttttagaacaactaaacatg
agattaaaagactatgagtctacaaaaaaaatctcaatagaattaaaaaaaaacaaaact
aaagacgtttttttaaatgaattagcactaaaaaagatactactgacacaatattcacaa
aaaatatacataacttctgaaaacaaaaatattgaaaatctcttatcttttgggcaaaaa
aaagagttatcgatttttataatatattcttttcttaaaattattgaagaaataataaaa
gatggtataataattcttttagatgactttgaagctgggttagatgaaagtaaagtaaag
aacttttatgaaattttttcagacaatcaattaatattaaccggtgtagataataaatat
ttaagcggtataaatacaatatgtttaaagggagtaaaatga
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