Deferribacter desulfuricans: DEFDS_0028
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Entry
DEFDS_0028 CDS
T01188
Symbol
cbiO
Name
(GenBank) cobalt ABC transporter, ATP-binding protein
KO
K02006
cobalt/nickel transport system ATP-binding protein
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DEFDS_0028 (cbiO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddf02000
]
DEFDS_0028 (cbiO)
Transporters [BR:
ddf02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
DEFDS_0028 (cbiO)
Nickel transporter
DEFDS_0028 (cbiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_13
AAA_29
RsgA_GTPase
AAA_30
AAA_23
AAA_15
nSTAND3
AAA_24
PhoH
MMR_HSR1
ATPase_2
AAA
AAA_28
ORC-CDC6-like
AAA_18
AAA_22
NB-ARC
AAA_14
PBECR3
nSTAND6
NACHT
RuvB_N
SbcC_Walker_B
Recombinase
AAA_7
NTPase_1
Roc
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAI79540
UniProt:
D3PAB7
LinkDB
All DBs
Position
complement(36557..37219)
Genome browser
AA seq
220 aa
AA seq
DB search
MSCSLKLTNISYKINDEYLFENINFHLKHKDKIAIIGPNGVGKTTLLKIISGLKKAESGE
IEIFHEKIVTEKDFERARKKIGFLFQNPDDQLILPNVKDDIAFGLFNLGFVKNTIQQKVE
NMINKLQINHLSNKITFKLSGGEKKLVALAGILVCEPDILLLDEPSAGLDNKSMERIGEI
IKELDKTVLIVSHNLEFVKQITSKIYHLTQSGLHEVKNLK
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagctgctcgttaaaattaacaaatataagttataaaattaatgatgaatatcttttt
gaaaacataaattttcatctaaaacataaagataaaatagcaattattgggccaaacggt
gtagggaaaacaactcttttaaaaataatttctgggcttaaaaaagctgaaagtggcgag
atagaaatttttcatgaaaaaatagttaccgaaaaagattttgaacgagccagaaaaaaa
atcggatttctttttcaaaatcctgatgaccaactgattctgccaaatgtaaaagatgat
attgctttcggcctatttaatctaggctttgtcaaaaatacaatacaacaaaaagtagaa
aatatgataaataagttgcaaataaaccatctatctaacaaaattacttttaaactctca
ggtggtgaaaaaaaactagtggctttagcaggtattttagtatgcgaacctgacatctta
ttgttagatgaaccttcagctggactcgataataaaagcatggaaagaataggggagatt
atcaaggagttagataaaacagtcttgatagtttctcataatttagagtttgtaaaacaa
atcaccagtaagatctaccatcttactcaatctggcttacatgaagtaaaaaatttaaaa
tga
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