Deferribacter desulfuricans: DEFDS_0141
Help
Entry
DEFDS_0141 CDS
T01188
Name
(GenBank) DNA polymerase III, gamma/tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03030
DNA replication
ddf03430
Mismatch repair
ddf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEFDS_0141
03430 Mismatch repair
DEFDS_0141
03440 Homologous recombination
DEFDS_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddf03032
]
DEFDS_0141
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_0141
Enzymes [BR:
ddf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEFDS_0141
DNA replication proteins [BR:
ddf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEFDS_0141
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEFDS_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_24
AAA_22
AAA_5
AAA_14
DnaX_C
AAA_16
Rad17
Glyco_tranf_2_5
AAA_2
AAA_30
AAA_19
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
BAI79653
UniProt:
D3PAN0
LinkDB
All DBs
Position
148706..150286
Genome browser
AA seq
526 aa
AA seq
DB search
MGYLALARKYRPQSFDEIVYQDYIVKTLKNAIELNRISHAYLFTGPRGIGKTSTARIFAK
ALNCLSPEGVNPCNKCENCVEVTNGTSLDVYEIDGASNRGIDEIRQLRESVKFLPTKSKY
KIYIIDEVHMLTEAAFNALLKTLEEPPSYVIFIFATTDAHRIPATILSRCQRFNFSKIPD
LKLIEHIRSILERENIEYEEDAVNLIVRNSDGCVRDCLSLIDQVIAYTGGKVFLDDTKYL
LGLSEDKIINELFEKIILKDNDSIKQLLSEIDLKGLDYKYVVEKFLSFTKTLLILKQFND
KNDVSLTNDERVFFDRLLDYVDDGYLFAVHQVLLKMYNDLRFYSFDKDIFEIGVFKLLNL
EKILPISAFSSDNKMSENKDSKIKKIEPQPVTNLSDKDKLWKDFIDKLGEKRPNIASNLG
YGYLIAIENDKLVIGFSEEKVFHYNIIMKNGNLDYVKKAAERFFDGVKDVVIKLENGSKK
KGVIEKVTEIETFKDKMLKNELKENSAVKLIENEFDATIKEIKLDK
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttagctttagcaagaaaatatagacctcaatcttttgatgagattgtatat
caagattatattgttaagacattaaaaaatgctatagaactaaacagaataagtcatgct
tatctttttactgggcctagaggtattggtaaaacgagtactgcgaggatttttgcaaag
gcattaaactgtttgagccctgaaggtgtaaatccatgtaataaatgtgaaaattgtgtt
gaagttactaacgggacatctttagatgtatatgaaatagatggagcctcaaatagaggt
attgatgagattaggcagctaagagaatctgtaaagtttttaccaacaaaatctaaatat
aaaatttacattatagatgaagttcatatgctgacggaggcggcatttaatgcactgcta
aagacattagaagaaccaccatcttatgtgatatttatttttgctacaactgatgcccat
agaataccagctaccatcctttcgcgatgtcaacgctttaatttttctaaaatacctgat
ttaaaacttattgaacatatcaggagtatattagaaagagaaaatatagagtatgaagaa
gatgcagttaatctgattgttaggaactctgatgggtgtgttagagattgtctttccctt
attgatcaagttatagcgtatactggcggtaaagttttcttggatgataccaaatattta
cttggtttatcagaagataagattattaatgaactttttgaaaagataattttaaaggat
aatgattctataaaacagctattgagtgagatagatttgaaaggcttggattataaatac
gttgttgaaaagtttcttagttttacaaagacattgttaatcctaaaacagttcaacgat
aaaaatgatgtttcattaactaacgatgaaagagtgttttttgatagattgctagattat
gtagatgatgggtatttatttgctgtccaccaagttttattaaaaatgtataatgactta
aggttttattcttttgataaagatatttttgagataggtgtttttaagcttttaaattta
gaaaagattttacccatatctgctttcagttcagataataaaatgagtgaaaataaagat
agtaagataaaaaaaatagagccacagccagttactaatctaagtgataaagataaatta
tggaaagattttattgataagttgggtgaaaaaaggccaaatatcgcttctaatctgggg
tatggatatcttatagcaatagaaaatgataagcttgtaataggtttttctgaggagaaa
gtgttccattataatataatcatgaagaatggaaatctagattatgtaaaaaaggctgct
gagcgtttttttgatggggtaaaagatgtagtaataaagctcgaaaatgggagtaaaaaa
aaaggggtgattgagaaagtaaccgagatagaaacttttaaagataaaatgctaaaaaat
gaattaaaggaaaatagtgctgttaagcttattgaaaatgaatttgatgctactataaaa
gaaattaaacttgataaatag
DBGET
integrated database retrieval system
