Deferribacter desulfuricans: DEFDS_0258
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Entry
DEFDS_0258 CDS
T01188
Name
(GenBank) DNA-directed RNA polymerase sigma 70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DEFDS_0258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddf03021
]
DEFDS_0258
Transcription machinery [BR:
ddf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DEFDS_0258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
ALMT
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BAI79766
UniProt:
D3PAZ3
LinkDB
All DBs
Position
complement(261839..262735)
Genome browser
AA seq
298 aa
AA seq
DB search
MDFELDKELENIEEITNDVPTDDLESITIYLNEIIKYPTLSKEEEIELSKRIEQGDEEAK
NLMINCNLKLVVSIAKKYNNRGLQLIDLINEGNIGLIKAVEKFDYRKGFKFSTYATWWIR
QAIERALVNQTKMVRIPVHMNENINKVKKATEKLRRKLKREPTLFELSTECNMSLLTIQK
TIDAMQQNISIDGTINEDDNSTLHDILPDPESKADPFKKIVQEKNRELIMNWIECLNENE
KELIIKRFGLDGKEPETLDKIGKRLGVTRERVRQIEKRILTKLRNHLKTKNIKLEELL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggactttgaattagataaagaacttgaaaacatagaggaaattacaaatgacgtacct
acagatgatttagaatccataacaatctatttaaacgaaataataaaatatccaaccctt
tcaaaagaggaagagatagagctttctaaaaggattgaacaaggggatgaggaagcaaaa
aacttaatgattaattgtaaccttaaacttgtcgtttcaatagccaaaaaatacaacaat
agaggtttacaattaatagatttaattaatgaagggaatataggtttgataaaagctgta
gaaaaatttgattatagaaaagggtttaaatttagcacatatgctacctggtggataaga
caagcaatagaacgtgctcttgttaatcaaacgaaaatggtcagaatacctgttcatatg
aacgaaaatattaacaaagtaaaaaaagctacagaaaaattgaggagaaagttaaaaaga
gagcccaccctgtttgaactttcaacagagtgtaatatgtctcttttaacaatacaaaaa
actatagacgcaatgcagcaaaatatttcaatagatggcacaataaatgaagatgacaat
agcacattacacgacatactccctgaccctgaaagtaaagccgacccatttaaaaagatt
gttcaagaaaaaaacagagaattaataatgaactggatcgaatgcttaaatgaaaacgaa
aaagaacttatcataaaaagatttgggcttgatggtaaagaacctgaaacattggataag
attgggaaaagattaggtgttacaagagaaagggtgagacagattgaaaaacggatatta
acaaaacttagaaatcatttaaaaactaaaaacataaagctggaggaactcttatga
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