Deferribacter desulfuricans: DEFDS_0481
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Entry
DEFDS_0481 CDS
T01188
Name
(GenBank) conserved hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEFDS_0481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddf03019
]
DEFDS_0481
Messenger RNA biogenesis [BR:
ddf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DEFDS_0481
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
FOXP-CC
Motif
Other DBs
NCBI-ProteinID:
BAI79975
UniProt:
D3PBK2
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All DBs
Position
462269..463828
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AA seq
519 aa
AA seq
DB search
MIWLYILLAVVGLIVGLLLGIIIQKKKNESENIRLNKTADEIINRAKREADEIVKEAKLE
AKDIIFKGKQELEKEVKEKRKELQLQEKRLISKEENIDKKLELVDKKEELISKREQELEE
KLNNLKSQMEEVEQLKVKLLSEVEKVAGMTREEAKEMLINEMVTEAKKEAARTLKELEEE
TKHLAEKKAQSIIATAIQRCAPEYVGEVAVSVVNLPSDEMKGRIIGREGRNIRTFESITG
VDIIVDDTPEAVILSSYDPFRREIAKLTLEKLISDGRIHPARIEEAYEKSKAELEKYILE
VGEETAFNLGLHNIHPDLLKLIGRLKYRTSYGQNVLAHSIEVAKIAGIMAAELGLDEKLA
KRAGLLHDIGKAIDQESEGSHTEIGVEIAKKYNEHPMVLNAILSHHGEEEFKFVESVLIQ
AADAISASRPGARREVLESYIKRLEKLEEIASSFEGVQKSFAIQAGREVRIIVEPDRIDD
AEIVTLSREISKKIEEELTYPGMIKVVVIRESRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatttggttgtatattttactagctgttgttggtttaattgtaggacttttattaggt
ataattatccagaaaaagaaaaatgaaagtgaaaacataaggctgaataaaacagctgat
gaaataattaacagagcaaaaagggaagctgatgaaatagttaaagaagcaaaactggaa
gcaaaagatattatttttaaagggaaacaagagcttgaaaaagaagttaaggagaagaga
aaagagcttcaacttcaagaaaagcgtttaatctctaaagaagaaaatatcgataaaaag
ttagaattagtggataaaaaagaagaacttatttctaaaagagaacaagagcttgaagag
aagcttaataatttgaagagtcagatggaagaggtcgaacagttaaaggttaaattatta
agtgaagttgagaaagttgccggtatgactagagaagaagcgaaagagatgttgattaat
gaaatggttactgaggctaaaaaagaagctgcaagaactttgaaagaattggaagaggaa
accaagcatttagctgaaaagaaagctcaaagtataattgcgacagctattcaaaggtgt
gctccagaatatgtgggtgaggtggcagtatctgttgttaatctccctagtgatgagatg
aaaggtaggattattggtagagagggtagaaatattagaacttttgaaagcattacagga
gttgatattattgtggatgatactccagaggccgttattttatcatcttatgatccattt
agaagagaaattgctaagctaacattggaaaaactcatttctgacggaaggattcatcct
gcaagaattgaagaggcttatgagaagagtaaagcagagcttgaaaaatacattttagaa
gttggtgaagaaactgcttttaatcttggactgcacaacatacaccctgatctattaaaa
ctgattggtaggttaaaatatagaacaagttatggacagaatgtactggcacactctatt
gaagtggctaaaattgctggtattatggctgctgaacttggtttggatgaaaagttggca
aaaagagcaggtttacttcatgatataggaaaagctatagatcaggagagtgaaggttcc
catactgagattggtgttgaaattgcaaaaaaatataatgaacaccctatggtgttaaat
gcaatattatcccatcatggagaagaggagtttaagtttgttgaatctgttttgattcag
gctgcagatgcaatttcagcttcaagaccaggagctagaagagaggttttggaatcttac
attaaaaggttagaaaaattagaagaaattgcttcatcttttgagggtgttcaaaaaagt
tttgcaatacaggcaggtagagaagtaagaattattgtggagcctgatagaattgatgac
gctgaaattgtaacattgtctagagaaattagtaagaagattgaggaagagctgacatat
cctggtatgataaaagttgttgttattagagaatcaagagctgtagaatatgcgaaataa
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