Deferribacter desulfuricans: DEFDS_0485
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Entry
DEFDS_0485 CDS
T01188
Symbol
glyA
Name
(GenBank) glycine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00260
Glycine, serine and threonine metabolism
ddf00460
Cyanoamino acid metabolism
ddf00630
Glyoxylate and dicarboxylate metabolism
ddf00670
One carbon pool by folate
ddf00680
Methane metabolism
ddf01100
Metabolic pathways
ddf01110
Biosynthesis of secondary metabolites
ddf01120
Microbial metabolism in diverse environments
ddf01200
Carbon metabolism
ddf01230
Biosynthesis of amino acids
ddf01240
Biosynthesis of cofactors
ddf04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DEFDS_0485 (glyA)
09102 Energy metabolism
00680 Methane metabolism
DEFDS_0485 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DEFDS_0485 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DEFDS_0485 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DEFDS_0485 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DEFDS_0485 (glyA)
Enzymes [BR:
ddf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DEFDS_0485 (glyA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAI79979
UniProt:
D3PBK6
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All DBs
Position
466069..467325
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AA seq
418 aa
AA seq
DB search
MSLYEAVKNIDPQVYDALMKELNRQETHIELIASENFVSKAVLEAQGSIMTNKYAEGYPG
KRYYGGCEFVDIAEQLAIDRAKELFGAEHANVQPHSGSQANMAVYFSVLQPGDTILGMNL
SHGGHLTHGSPVNFSGKFFNVVPYGVNKDTETIDFDEVERLALEHKPKMIVVGASAYPRV
IDFAKFREIADKVGAYVMVDMAHIAGLVAAGVHPNPVPYADFVTTTTHKTLRGPRGGLIL
CKEEYAKKVNSMIFPGTQGGPLMHVIAAKAVALKEAMTDEFKEYQKQIVKNAKALADTLK
DKGFRLVSNGTDNHLMLVDLTDKDITGKDAEESLGKANITVNKNTIPFETRSPFITSGIR
IGTPAVTTRGMKEDAMEDIGNYIAEVLYNINNESVINTVKEKVIKLCNKYPLYKGVLY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagtctatatgaagcagtaaaaaatatcgatccacaagtgtatgatgctttgatgaaa
gagttaaataggcaggagactcatatagagttgattgctagtgaaaactttgtttcaaaa
gcagtgttagaggcacaaggttcaataatgacaaataaatatgcagaagggtatccaggt
aaaaggtattatggtggctgtgagtttgtggatattgctgagcagcttgctatagatagg
gcaaaagagctgtttggtgcagagcatgctaatgtgcaaccacactctggaagtcaggca
aatatggctgtctatttttcagttttgcaaccaggtgatacaatcttggggatgaattta
tctcatggagggcacttaacacacggtagcccagtaaatttttctggtaaattttttaat
gttgtaccttatggtgtaaataaggatactgaaactatagattttgatgaagtggaaaga
ctggcattagagcacaaaccaaagatgattgttgttggagcaagcgcatatccgagagtt
atagattttgctaaattcagggagattgcagataaagttggagcttatgtgatggtggat
atggctcatattgcggggcttgttgctgcgggggttcatccaaaccctgttccttatgca
gattttgtgacaacaaccactcataaaacattgaggggaccaagaggtggcttaatcctt
tgtaaagaggagtatgcaaaaaaagttaactctatgattttccctgggacacagggtggc
ccattaatgcatgttattgccgctaaggcagtagctttaaaagaggcaatgactgacgaa
tttaaagagtatcagaagcaaattgtgaaaaatgcaaaagctttggccgacactcttaaa
gataaaggttttagactcgtgtctaacggaacagataatcatttgatgcttgttgattta
actgacaaagatattacaggtaaagatgcagaagaatcacttgggaaagctaatataaca
gtaaataaaaacactatcccttttgagacaagaagtccgtttatcacaagtggtattaga
attggtacaccagctgtaactactcgaggtatgaaagaggatgcgatggaagatatagga
aattatattgctgaagtgttatataatataaacaatgaaagtgttataaatacagtaaaa
gaaaaagttattaaattatgtaataaatatccattatacaaaggtgtattgtattga
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