Deferribacter desulfuricans: DEFDS_0594
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Entry
DEFDS_0594 CDS
T01188
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00470
D-Amino acid metabolism
ddf00550
Peptidoglycan biosynthesis
ddf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DEFDS_0594 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DEFDS_0594 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddf01011
]
DEFDS_0594 (murD)
Enzymes [BR:
ddf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
DEFDS_0594 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ddf01011
]
Precursor biosynthesis
Amino acid ligase
DEFDS_0594 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BAI80076
UniProt:
D3PBV3
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Position
564962..566203
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AA seq
413 aa
AA seq
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MRAAIVGYGLSGKSAEKILREILKVDNIAIFDDKQDGFKPTADFDDENFDLVVVSPGLNI
EKLNVNNKSKVISEYELVFNLVKDKTFIGITGSNGKSTTTFLTSQILNKIGLKSVACGNI
GYPLGYAIFDDFDYFVVEFSSFQIDLMRKGEFLDAGVIINITPDHLDRYKTFENYLKSKV
RLSELLKDDGFFVVGKDITSYIANYDLCIDTDFNDYPKLKGDVLYFENFYINVNHFPLVG
KHNLVNLSFALEIVNNFYELKGDVTHLIEDLKGLPHRCEIVREIDGILFVNDSKGTNVDS
TKTALKGLDGKIILLLGGLDKDGDFSELNDDIKKKCKAVVCFGRDAKNIYDQIDFEKKIL
VNKLKEAFDTSTELAKSGDIVLLSPGCASFDEFNNFEERGEYFKKLVDEYASK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagcgatagtaggttatggtttaagcggtaaaagtgctgagaaaatactgaga
gaaattttaaaagttgataatatagctatatttgatgataaacaagatggttttaagcca
actgctgattttgatgatgaaaattttgatttggttgttgtaagtccaggattaaatata
gaaaaactaaatgtcaataataaatctaaagttataagtgaatatgaacttgtatttaat
ttggttaaagacaaaacatttataggaattacaggtagcaatggtaaatcgactaccaca
tttctaacatcacagattttaaacaaaattgggctcaaaagtgttgcttgtggaaatata
ggatatccacttggctatgcaatatttgatgattttgattattttgttgtggaattttca
agttttcaaattgatttgatgagaaaaggggaatttttagatgcaggagtaataataaat
attacacctgaccatttagataggtataaaacatttgaaaattatctcaaatcaaaagta
aggttgtctgagcttttaaaagatgatggattcttcgtagttggtaaagatataacaagc
tatattgcaaattatgatttatgcattgatactgattttaatgattatccaaaattaaaa
ggtgatgtcctatattttgaaaatttttatataaatgttaatcatttccctttagttgga
aaacataatctggtgaatctcagctttgcattagaaattgtaaataatttttatgagcta
aaaggggatgttacccacttaattgaagatttaaagggtttacctcatagatgtgaaatt
gttagagaaattgatggtattttatttgtaaatgattctaaagggacaaatgttgattcc
actaaaacagcactaaaagggctggatggtaaaataattttattgcttggtggcttggac
aaagatggtgactttagtgaattaaacgatgacattaaaaagaaatgtaaggctgtggtt
tgctttggtagagatgcaaaaaatatttatgatcagatagattttgagaaaaaaatattg
gttaataagcttaaagaagcctttgatacaagtactgaactagcaaaaagtggcgatatt
gttttactttctccaggttgtgcaagttttgatgagtttaacaactttgaagaaagaggt
gaatattttaaaaagttggtggatgaatatgccagcaaatag
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