Deferribacter desulfuricans: DEFDS_0623
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Entry
DEFDS_0623 CDS
T01188
Name
(GenBank) conserved hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03030
DNA replication
ddf03430
Mismatch repair
ddf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DEFDS_0623
03430 Mismatch repair
DEFDS_0623
03440 Homologous recombination
DEFDS_0623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddf03032
]
DEFDS_0623
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_0623
Enzymes [BR:
ddf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DEFDS_0623
DNA replication proteins [BR:
ddf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DEFDS_0623
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DEFDS_0623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DNApol_Exo
DEDDh_C
CAF1
Motif
Other DBs
NCBI-ProteinID:
BAI80104
UniProt:
D3PBY1
LinkDB
All DBs
Position
595160..595903
Genome browser
AA seq
247 aa
AA seq
DB search
MIFSTNQYKIKVNRWGMIKKFFKSFKYNKKSSKTDPLSSYIKSLIDSVNNDKIFNQKIEH
AKFCVIDTETTGLDFETAKLINIAAVKVVNFKILDIYDVFINPEIPIPEESIKWHGITDD
MVKDKPTVAEILPDFLKFIRDSVIVGHHVNFDLKMINKDLKLYYGSEIKNIWIDTMFLYS
KNILCRDDHISLDFLLEKFNVKCIGRHTALGDALATAEVFNKIVVKMKNGFKTVSDLYRS
QFKEFHS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgatttttagcacaaatcaatataaaataaaagtcaacaggtgggggatgataaaaaaa
ttttttaaaagtttcaaatataataaaaaaagttcaaaaacagatcctttatcttcatat
attaagagtcttattgatagtgttaacaatgataaaatattcaatcaaaaaatagaacat
gcaaagttttgcgttattgataccgaaactacaggtcttgattttgaaacagctaagctt
atcaatattgcagctgtaaaggttgttaattttaagattttagatatttatgatgttttt
atcaatccagaaattcctatcccagaagaatcaataaaatggcatggtatcactgatgat
atggtcaaagataagccaactgtagccgaaattttgcctgattttttaaagtttattaga
gattctgtgattgtaggtcatcatgttaattttgatttaaaaatgataaacaaagatttg
aaattatattatggctctgagattaagaatatatggatagatactatgtttttatattca
aagaatattttgtgtagagatgatcatataagtttggattttttgcttgaaaaattcaat
gtgaaatgtatcggtaggcatacagctcttggcgatgctttagctactgctgaggttttt
aataaaattgtcgttaaaatgaagaacggttttaaaacagtaagtgatttatatagatct
cagtttaaagagtttcattcttag
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