Deferribacter desulfuricans: DEFDS_0642
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Entry
DEFDS_0642 CDS
T01188
Name
(GenBank) long-chain fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00061
Fatty acid biosynthesis
ddf00071
Fatty acid degradation
ddf01100
Metabolic pathways
ddf01212
Fatty acid metabolism
ddf02024
Quorum sensing
ddf04146
Peroxisome
Module
ddf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DEFDS_0642
00071 Fatty acid degradation
DEFDS_0642
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DEFDS_0642
09145 Cellular community - prokaryotes
02024 Quorum sensing
DEFDS_0642
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ddf01004
]
DEFDS_0642
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddf04147
]
DEFDS_0642
Enzymes [BR:
ddf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DEFDS_0642
Lipid biosynthesis proteins [BR:
ddf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DEFDS_0642
Exosome [BR:
ddf04147
]
Exosomal proteins
Exosomal proteins of breast milk
DEFDS_0642
Exosomal proteins of breast cancer cells
DEFDS_0642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF4738
Motif
Other DBs
NCBI-ProteinID:
BAI80122
UniProt:
D3PBZ9
LinkDB
All DBs
Position
complement(613612..615153)
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AA seq
513 aa
AA seq
DB search
MNFKNLGDMLIQNAKKLKSKKYIFFEDKKYTYAEVNKITNKVAHALTNLGLKKGDRVAIL
LDNSPEFLFSFFGITKCGAVAVPINNFLKQEEIGYILNDCQVKYLITSENYQDFFPYLKE
NVSSLNATLTYNFLSPHSVNFSELINNEPDNDPPCDFEMDDLAVLIYTSGTTGHPKGAML
THKNLLSNCDACNKAFKVKKSDRFLLFLPMFHSYAFTTCVLLPTFLGCSIIILRSVMELR
SKKFKNVLLFKRPTFFLGVPQVYSALSKAKLPKWFIKFLYPVRIHVSGGAPLPEEILNVF
KEKFKRPIIEGYGLSEASPVVAVNRLEWQKPYSVGLPLPDVEVKIVNDDEEELPVGEIGE
LIVKGPNVMKGYWNLPEATEQAIRNGWLFTGDMAKIDEDGFIYIVDRKKDLIIVKGINVY
PREIEELLYQYPGVEAAAVIGVPDEASGEVPVAYVMPKENESLNEKDIKNYLKSHLANFK
VPKKIHIVDELPMTATGKVLKRKLKEQVLQSTE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaaaacttaggtgatatgctgatacaaaacgcaaaaaaattaaaatcaaaa
aaatatattttctttgaagataaaaaatatacctatgcagaagtcaataaaattacaaat
aaagttgcacatgctctgacaaatttagggcttaaaaaaggggatagagttgcaatactt
cttgataattcgcctgaatttctcttttcattttttggaataacaaaatgtggagcagta
gcagttccaataaacaactttttgaaacaggaagaaattggatatattctaaacgattgt
caggtaaaataccttattacctcagaaaattatcaagattttttcccatatttaaaagaa
aatgtttcatcgttaaatgcaactttgacatataactttttatctccacattccgttaat
tttagcgaactgataaataatgagcctgataacgacccaccttgcgattttgagatggat
gatttagctgttttgatatatacgtccggcactacaggtcatccaaaaggggcgatgctt
acacataaaaatttgctttcaaactgtgatgcatgtaataaggcgtttaaagtaaaaaaa
tctgaccgatttttacttttcttacccatgttccattcttacgcattcacaacttgtgtt
ttattaccaacgttcttaggttgctcaataataattttacgctccgtcatggagttaaga
agcaaaaaatttaaaaatgttcttttatttaaaaggcctacattctttttgggtgtgcca
caggtttattcggcactttcaaaagctaaactacctaaatggtttataaagtttttatat
ccagtaagaattcatgtcagtggtggagctccattaccagaagagattttaaatgtattc
aaagaaaaatttaaaagaccaatcatagaaggctatggcttatccgaagcctcacctgta
gttgctgtaaatagactagaatggcaaaaaccatattctgttggtttacctcttcctgat
gtcgaagtaaaaattgttaatgatgatgaagaggaattgccagttggagaaataggtgag
ttgatagtaaaaggtccgaatgttatgaaagggtattggaatctgccagaagctactgaa
caggcaattagaaatggatggctttttactggtgacatggcaaaaattgatgaagatggt
tttatctacatcgtagataggaaaaaagatcttataattgtaaaagggataaatgtttat
ccaagagaaatagaggagctgctctatcaatatcctggagttgaagcggctgctgtcata
ggggttcctgatgaggcaagtggcgaagtgcccgttgcttatgtaatgcctaaagagaat
gaatctttaaatgaaaaagatataaaaaattatctaaaatctcatctggctaatttcaaa
gttccaaagaaaatacatattgttgacgaattaccaatgactgcaacaggcaaagtttta
aaaagaaaacttaaagagcaagttttacaatcaacagaataa
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