Deferribacter desulfuricans: DEFDS_0685
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Entry
DEFDS_0685 CDS
T01188
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase, iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00020
Citrate cycle (TCA cycle)
ddf00190
Oxidative phosphorylation
ddf00650
Butanoate metabolism
ddf00720
Other carbon fixation pathways
ddf01100
Metabolic pathways
ddf01110
Biosynthesis of secondary metabolites
ddf01120
Microbial metabolism in diverse environments
ddf01200
Carbon metabolism
Module
ddf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ddf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ddf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DEFDS_0685 (sdhB)
00650 Butanoate metabolism
DEFDS_0685 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
DEFDS_0685 (sdhB)
00720 Other carbon fixation pathways
DEFDS_0685 (sdhB)
Enzymes [BR:
ddf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DEFDS_0685 (sdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_9
Fer4_7
Fer4_16
Fer4_2
Fer4_4
Fer4_18
Abhydrolase_9
Motif
Other DBs
NCBI-ProteinID:
BAI80165
UniProt:
D3PC42
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All DBs
Position
complement(663352..664062)
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AA seq
236 aa
AA seq
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MSRYVTFEIFRYDPEKDKEPYYQTYKVEIRRPGMLMLEGLNQIKWEQDPTLAFRRSCREG
VCGSDGINVNGVNMLSCITKIEDLGTDHLVIQPLPGMPVMRDLVVDVTDFFEKFITVKPY
LIRKSPTPDKEFYQSPEDRKKLDGLYECILCGCCSSSCPSYWADKNYLGPNAFLRAWRYL
ADSRDEGADERLPILNDKHGVWRCHTIYNCVEACPKELNPTKAIVEIRRMLMNRNY
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtagatatgttactttcgaaatatttagatatgacccagaaaaggataaagaacct
tattatcaaacatacaaagtagaaataagaaggcccggtatgctcatgttagaaggcctc
aatcagattaaatgggagcaagatccaactcttgctttcagaagatcatgccgtgaaggt
gtttgtggatctgatggtataaatgtaaacggcgtaaatatgctttcatgtattacaaaa
attgaagatcttggtacagaccatcttgtaattcagcctttaccaggcatgcctgtaatg
agagaccttgttgttgatgtaacagatttttttgaaaaattcatcacagtaaaaccttat
ttaatcagaaaatctccaactccagacaaagagttttatcagtcaccagaagataggaaa
aaacttgatgggctttatgaatgtatcctttgtggatgctgttcttcatcttgcccttca
tactgggcagataaaaactatcttgggccaaacgctttcttgagagcatggagatatctt
gctgactcaagagatgaaggagctgatgaaagattacctatcttaaatgataaacatggt
gtttggagatgtcatacaatttacaactgtgttgaggcatgtccaaaagagcttaaccca
actaaagctatcgtagaaattcgtagaatgttaatgaatagaaactattaa
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