Deferribacter desulfuricans: DEFDS_0736
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Entry
DEFDS_0736 CDS
T01188
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DEFDS_0736 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_0736 (recC)
Enzymes [BR:
ddf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DEFDS_0736 (recC)
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DEFDS_0736 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAI80215
UniProt:
D3PC92
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All DBs
Position
716341..719388
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AA seq
1015 aa
AA seq
DB search
MKNGLHLYLSNDLNILFDKLYTNIKSASVKHFFDRRWIVVQTDGMVRWLSLKFTEREGFF
SNFNFLFPRNFILEILEILQLLDKEKALLDKKEIFLEILRYLQKSVPKELSAYIDDVGGK
KCVQLALKLSDIFDQYITYRYEYLLNPDKIMTKWQRELFKKVVVSRQNIVVGIQKFIEDK
FDKNLLEKIPDTINLFSISILPPIYINFLKNLSQFKRVNLYTINPSKSYWFEDLGEKARV
YFEKKYGSLTDYFEDGNTILLNNGKMLQEFISLLYDMEPTPIEYEDYKDYDGKTALSTLK
QSIFENVKDAEIVNDDTIQVHSFHSKLREVEGVYNYILSVLDKDKSISLEDIVVMCSDIN
EYAPFIDAVFKNKDIKYNISDNSYLNDDVGIKGVFKILSCLREDLSVVDFLDMIENEAIR
SKFDINQNELNVINYLINELNLRWGLSESEIKSFYENISLNNTFGYFYKRLMLGMISGED
YIIDNVLPYTNIKLSQADLLGKLLYIIDKIKFYYESFKDKVSLENAKKILFNIVDDFIGE
NFSDSASFLSFLSELEKIESEEIIVDLEGFLEILRVVTNDVKNSYNFMRGGITFCELVPL
RSIPFKVVCMLGMTDENFPRKDVKLFINEMEKNRRKGDRNAKLSDRLLFLDTIISAEKYL
YISFIGRDLKKNKIINPSLPVVELVDFMHLERIEHPLHSFNSKYFEKNSKLYNYNEDDFK
IASNNNLSFEKENILVLSSKQVDNGEKVEKIGLSKLTTFLRNPLKYYFKENGIDFEEETS
VLESKEPLYLGKYDEYNLIFKILRDFKVIDKLEFSGDLPHANIGKGYLERIKRRLYYLDN
LLKGVSPEYSLKLLNDLDINCKISDKFSLEGKIYYQINGNLFFMDFFNKAKDKSYQLEWV
VKTLVSNKNSFYLIRENEIKSADFNLDFSYLSFIVDVFERGKCQPIIFDDKIVDKTYEEF
LRSLENSLFQKMFNNKVDNYLIYFVDNFEINRSYFEFLKEINQKLYNFEVNFETI
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggactacatttatacctttcaaatgatttaaatatactttttgataaatta
tatacgaatattaaatcagcatctgttaaacatttctttgatcggagatggattgttgtt
caaacagatgggatggttagatggttgtctttaaaatttaccgaaagagaaggttttttt
agcaattttaattttctttttccaagaaattttatattagaaattttagaaatattacaa
cttcttgataaagaaaaagcacttttagataaaaaagaaatatttttggaaattcttaga
tacttacagaaaagtgttccaaaagagctctcagcatatattgatgatgttggtggtaaa
aaatgtgtccaacttgcgttgaaactatctgatatttttgaccagtatataacttatagg
tatgaatatctattaaatcctgacaaaataatgacaaaatggcagagagaactttttaaa
aaggttgttgtttcaaggcaaaatattgttgttggtattcaaaaatttatagaagataaa
tttgataaaaaccttcttgaaaaaatacctgatacaataaatcttttttccatatccatt
ttacctccaatttatattaattttttgaaaaatttgtcacagtttaaaagggttaattta
tacactatcaatccctccaaaagttattggtttgaagatttaggcgaaaaggcgagagta
tattttgaaaagaaatatggtagccttactgattattttgaggatggcaatacaatatta
ttgaataatggtaagatgttacaggagtttatttctttattatatgatatggagccaaca
cctatagagtatgaagattataaagattacgatggtaaaaccgctcttagcacacttaaa
cagagtatttttgaaaatgttaaagatgcagaaattgtaaatgatgacacaatccaagtc
cactcttttcatagtaaactgagagaggtagaaggtgtttataattatattttaagtgtt
cttgataaggataagtcaatttctttagaagatattgtagtgatgtgctctgatataaat
gaatatgccccttttattgatgcagtatttaaaaacaaggatatcaaatacaatatctct
gataatagttatttaaatgatgatgttggtattaaaggagtttttaagattttgagctgt
ttgagggaagatttgagtgtggttgattttttagatatgattgagaatgaagctattaga
tcaaaatttgatatcaatcaaaacgagttgaatgtaataaattatctgataaatgagctg
aatctaaggtgggggctttctgaaagtgaaataaaaagtttttatgaaaatatatcttta
aataatacttttggatatttttataagagattgatgttggggatgattagtggagaagat
tatattattgataatgtgttgccatacacaaatattaaactttcgcaggcagatctgctt
ggtaagttactttatattattgataaaataaaattttattatgaatcttttaaagataaa
gtatctttagaaaatgcaaaaaagattttgtttaatattgttgatgattttatcggtgaa
aattttagcgattcagcctctttcctaagttttttaagtgagttagaaaagattgaaagt
gaggaaataatagttgatttagaaggttttttagagattttaagggtagtaacaaatgac
gtgaaaaattcttataattttatgaggggagggataaccttttgtgagcttgttcctctt
agaagtatcccttttaaagtggtttgtatgcttgggatgacagatgagaattttccacgg
aaagatgttaaactttttattaatgaaatggaaaaaaatagaagaaaaggggatagaaat
gcaaaactttctgacagactgttgtttcttgatacaataatttctgctgaaaaatatctt
tatataagctttatcggtagagacttaaaaaagaataagataattaacccttcacttcct
gtggtggagcttgttgattttatgcatttagaaaggattgagcacccactgcactctttt
aatagtaaatattttgaaaaaaatagtaaactttataattataacgaagatgattttaaa
atagcatctaataataatttgagttttgaaaaagagaatattttggttttatcttcaaaa
caagtagataatggagaaaaagtagaaaagattggtctaagtaaacttactacttttttg
cgcaatccgttaaaatattattttaaagaaaatggtattgattttgaagaagaaacaagt
gttttagagtcaaaagaacctctttatcttgggaaatatgatgaatacaatttaatcttt
aaaatattaagagattttaaagtgattgataagcttgaatttagtggagatttgcctcac
gcaaatattggaaaagggtatttagaaagaataaaaaggaggttatattatcttgataat
ttgttaaaaggagtttcacctgaatattctcttaaattgctaaatgacttagatattaat
tgtaaaattagtgataaattttcactggaggggaaaatttattatcagataaatggcaac
ctattttttatggatttctttaacaaagctaaagataaaagttatcagttagaatgggta
gtaaaaactttggtttcaaataaaaatagtttctatcttattagggaaaatgaaataaaa
tctgccgattttaacctcgattttagttatttatcttttattgtggatgtttttgagcgt
ggaaaatgccaaccaataatatttgacgataagatagtagataaaacatatgaagaattt
ttgagaagtcttgaaaactctttatttcaaaagatgtttaataacaaagtagataactat
ctgatatattttgttgataactttgaaatcaacagaagttattttgaatttttaaaagag
attaatcaaaaactgtataattttgaggtaaattttgaaactatttga
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