Deferribacter desulfuricans: DEFDS_0945
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Entry
DEFDS_0945 CDS
T01188
Name
(GenBank) geranyl diphosphate synthase / farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00900
Terpenoid backbone biosynthesis
ddf01100
Metabolic pathways
ddf01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DEFDS_0945
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ddf01006
]
DEFDS_0945
Enzymes [BR:
ddf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DEFDS_0945
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DEFDS_0945
2.5.1.29 geranylgeranyl diphosphate synthase
DEFDS_0945
Prenyltransferases [BR:
ddf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DEFDS_0945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BAI80417
UniProt:
D3PCU4
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All DBs
Position
complement(945349..946251)
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AA seq
300 aa
AA seq
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MSENFNLKNYIKFFAQRVDDWIRNYLTYENEQTIGLIESMRYSIFAGGKRLRPVLIYSSY
GIFESYFDKVTPFAAAVEMLHTYSLIHDDLPAMDDDDLRRGKPTNHKMFGEATAILAGDA
LLTLAFEIMLDKDINKDIPTETILEAAFKLAKSAGYKGMVGGQYADIINENKEIDKNTLD
FIHKHKTAALISYCCELGAILGFADEKDKQNLAEFGEKIGLAFQIVDDILDITSTTEELG
KNAGSDLKNKKATYPEIYGLEKSKSIAEDLINSAINILKPYGKAATPLIEIANYILKRNN
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaattttaacttaaaaaactatataaaattttttgcacaaagagtagacgac
tggataagaaactatttaacttatgaaaacgaacaaactataggtctaatagaatcaatg
cgttatagcatctttgctggtggcaaaagattaagacctgtattaatttactcctcttac
ggtatatttgaaagttattttgataaagttaccccttttgctgctgcagtggaaatgctc
catacttattctctaatccacgatgatttgcctgctatggatgacgatgatttaagaaga
ggtaaacccacaaatcacaaaatgtttggagaagccactgccatattagctggtgatgca
ttattaactttggctttcgaaattatgctcgataaagatataaacaaagatattcctaca
gagacaatacttgaagcagcttttaaattagctaaaagtgctggttacaaaggtatggtt
ggtggacaatatgcagacataattaatgaaaacaaagagatagacaaaaatacgttagat
tttatacataagcataaaactgcagcactcatctcttattgctgtgaacttggagcaatt
ttaggttttgcagatgaaaaagataaacaaaatttagccgaatttggcgaaaaaattggt
ttagcatttcaaattgtagatgacatactagatatcacttcgactactgaagagcttggt
aaaaacgcaggaagtgatttaaaaaataaaaaagcaacataccctgaaatatatggtctg
gaaaaatcaaaatcgatagctgaagatttaattaattctgcgataaatattttaaaacca
tatggtaaagctgcaacacctttgatagaaatagcaaactatattttaaaaaggaataat
tga
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