Deferribacter desulfuricans: DEFDS_1195
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Entry
DEFDS_1195 CDS
T01188
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DEFDS_1195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddf03019
]
DEFDS_1195
03110 Chaperones and folding catalysts [BR:
ddf03110
]
DEFDS_1195
03029 Mitochondrial biogenesis [BR:
ddf03029
]
DEFDS_1195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddf04147
]
DEFDS_1195
Messenger RNA biogenesis [BR:
ddf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DEFDS_1195
Chaperones and folding catalysts [BR:
ddf03110
]
Heat shock proteins
HSP70 / DNAK
DEFDS_1195
Mitochondrial biogenesis [BR:
ddf03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
DEFDS_1195
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
DEFDS_1195
Exosome [BR:
ddf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DEFDS_1195
Exosomal proteins of breast cancer cells
DEFDS_1195
Exosomal proteins of colorectal cancer cells
DEFDS_1195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Ppx-GppA
BcrAD_BadFG
RecA-like_ORC2
Hydantoinase_A
Globin
FGGY_C
Motif
Other DBs
NCBI-ProteinID:
BAI80663
UniProt:
D3PDJ0
LinkDB
All DBs
Position
1195895..1197403
Genome browser
AA seq
502 aa
AA seq
DB search
MGSYTVGIDFGTTNSLIAIYRDKEQVEVINTDSGDKFLPSVVYFKNEKEVIVGNNAKAVE
VIEPEFTISNVKRFLGSDKTYKIYDMEFLPEDIAYFIFKKLKTVFDEFAGSNNKVNAVVT
VPAYFDHLQRESVRVAAEKAGFNVLLLVNEPTAAFIYYDNIYNLDKGNYFVFDLGGGTLD
ISLVESDEHFCKVLSSVGSTDIGGIDFDICLADYFVKQFLDKYDINLKEDKVAYQQLILQ
SERAKKELSNLKEINVVIPYITQTKNGVLHFKELITREQFKSISKNILKKIEQILNKFKE
ENEEYLKEVYNVLLVGGGSRLFLMEDFLNNHLKKAVRKNLNPEEAVVKGAALIAAMLSGK
LEKKEFYDVTTHNLGVEDDEGNFEIIIKKNEIYPIKTSKVFTNSIDNIEEIVVHVLQDMA
ITTLNESISIKDNPDNFVSLGQFSMEIDKNLKAGDANLEIIFNIDSNGIISIKAKDLNRN
IEKDFILKKTINNPNLETIDVL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttatactgtaggcatcgattttggaactacaaactctttaattgcaatttat
cgtgataaagagcaagttgaagtcatcaatactgatagtggagataagtttttaccatca
gttgtgtactttaaaaatgaaaaagaagttattgttggtaataacgctaaagctgttgaa
gttattgaacctgaatttaccatatcaaatgttaaaaggtttttaggtagtgacaaaaca
tataaaatttatgatatggagtttttacctgaagatattgcatattttatctttaaaaag
ttaaaaactgtttttgatgaatttgctggttcaaacaataaggttaacgcagttgttact
gttccagcatatttcgatcatctgcagagggagtcggttagagttgcagctgaaaaagct
ggttttaatgttttattgttagtaaatgaacctacagcagctttcatatattacgataat
atatacaatcttgataaaggaaattattttgtatttgatttaggaggaggaacattagat
ataagtttagttgaatctgatgagcatttttgtaaggttttatcatctgtaggttctaca
gatataggtggaatagattttgatatttgtctagcagattattttgtgaaacagttttta
gataaatatgatattaatttaaaagaagataaagttgcttatcaacaacttattttacaa
tctgaaagggctaaaaaagaactgtcaaatttaaaagaaattaatgtggtgataccttac
ataacgcaaaccaaaaatggtgttttgcattttaaggaacttattactcgagaacagttt
aaatctatttcaaaaaacatattgaaaaaaattgaacaaatactaaataaatttaaagaa
gaaaatgaggaatatctaaaagaagtttataatgttctgttagtaggtggtgggtcaagg
ttatttttaatggaagattttttgaataatcacttaaagaaagcggttagaaaaaattta
aatccggaagaagctgtagttaaaggagctgctttaattgctgccatgttatctggaaaa
ctagaaaaaaaagagttttatgatgtgactacccataatttgggtgttgaggatgatgaa
ggaaattttgaaattattattaagaaaaatgaaatttatccgataaaaacaagtaaggta
tttacaaacagtatagataatattgaggaaattgttgtgcatgttttacaagatatggct
ataacaacattaaatgaatctatatcaataaaagacaatcctgacaactttgtaagttta
ggtcagttttcaatggaaattgataaaaatttaaaagcaggagacgcaaacttagagata
atttttaatattgatagtaatggaataatttctattaaagcaaaagatttaaatagaaat
attgaaaaggattttattttgaaaaaaactattaataatccgaatcttgaaacaattgat
gtgttataa
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