Deferribacter desulfuricans: DEFDS_1217
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Entry
DEFDS_1217 CDS
T01188
Symbol
carB
Name
(GenBank) carbamoylphosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00220
Arginine biosynthesis
ddf00240
Pyrimidine metabolism
ddf00250
Alanine, aspartate and glutamate metabolism
ddf01100
Metabolic pathways
ddf01110
Biosynthesis of secondary metabolites
ddf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DEFDS_1217 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DEFDS_1217 (carB)
00220 Arginine biosynthesis
DEFDS_1217 (carB)
Enzymes [BR:
ddf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DEFDS_1217 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
GARS_A
ATPgrasp_Ter
RimK
ATP-grasp_5
CoA_binding_2
Epimerase
Adenine_glyco
DUF3744
Motif
Other DBs
NCBI-ProteinID:
BAI80685
UniProt:
D3PDL2
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All DBs
Position
1226110..1229337
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AA seq
1075 aa
AA seq
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MPKREDLNTIMIIGSGPIVIGQACEFDYSGSQAVKALKEEGYRVVLVNSNPATIMTDPEF
ADATYIEPLTVEIVEKIIKKEQPDAILPTVGGQTALNLAIDLHKARVLEKYNVELIGAKI
DAIQKAEDRELFKKAMAKIGLDMPKSAYVNSYDEAMKVIKDIGFPAIIRPSFTLGGTGGN
VAYNMEEYREYVIWGLEASPVNEILVEESIIGWKEIELEVMRDLKDNVVIICGIENFDPM
GVHTGDSITVAPIQTLTDKEYQYLRDAAIKVIREIGVDTGGSNVQFAVDPKTGRQVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITKKTPACFEPTIDYCVVKYPR
FTFEKFPGADDTLTTQMKSVGEVMAIGRTFKEAFQKAINSLEIGKTGFDEIFSEEELQKD
SVKDEIIRFLKRPTDKRVFYIAESLRAGFTIDEIYNLSKIDKWFLENIKEIIDFEKKIKE
TKKLDENTLIEAKKLGFSDKRLAKLLNLKEEDIREKRNTYNLKPVYKRVDTCAAEFESNT
PYMYSTFEEECESYPTNNKKVVILGGGPNRIGQGIEFDYCCVHASYALREVGYETIMVNC
NPETVSTDYDTSDRLYFEPLTFEHVMNIIEKENPYGVIVQFGGQTPLKLAVPLEKAGVNI
LGTSPDSIDIAEDRERFQKLLKDINLKQPDNGIAKNFEEALNIAENIGYPVVVRPSYVLG
GRAMEIVYDQDSLKNYMKYAVEASEEHPVLIDKFLENAIEVDVDAISDGESTIVAGIMQH
IEEAGIHSGDSACSIPPRSLSDEIIEEIKRATISLAEKLNVKGLMNVQYAIKDNQLYVLE
VNPRASRTVPYVSKSIGKSLAKLASKVMVGYKLKDLGFTKEVNIPYFTVKESVFPFTKFP
GTDPILGPEMKSTGEVMGIDKTFGRAYYKAQIAANNSLPTTGTVFISVKDRVKKDILPVA
KKLEKLGFKIVATTGTYKFLRENGINAEHVLKVQEGRPNIVDLIKSDKIDFVINVPEGKK
SRLDSNSIRRVILNYNIPYVTTVEAAIASVNGVEAYLNEGLSVKSLQEYYKEIVY
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
gtgccaaaaagagaagatctaaacaccatcatgattataggttcaggtccaatagtcatt
ggtcaagcttgcgaatttgattattctggaagtcaagctgttaaggctttaaaagaagaa
ggttatcgagtagtattagttaactctaacccagccacaatcatgactgatcctgaattt
gctgatgccacatatatagaaccgttaactgtagaaatagtagaaaaaattataaagaaa
gaacaaccagatgccattctcccaaccgttggtggacaaacagctttaaatttagctatc
gatttacacaaagctagagttttagaaaagtataacgtggagctaattggcgcaaaaata
gatgcaattcaaaaagctgaagatagagaattatttaaaaaagctatggcaaaaatcggt
ttagatatgccaaaaagcgcgtatgtaaactcttatgatgaagcaatgaaagtaattaaa
gatataggttttcctgcaattataagaccttcttttactcttggcgggacaggtggtaac
gttgcctacaacatggaggaatatagagaatacgtaatatggggattagaagcctctcca
gtaaatgaaattcttgtagaagaatcgataatcggttggaaagaaatagaactagaagtg
atgagggatttaaaagataacgttgtaattatttgtggaatagagaattttgatcctatg
ggtgttcatactggtgatagtattactgttgctccaattcaaactttaactgataaagaa
taccaatatttaagggatgcagctataaaagttattagagaaattggtgttgatactggc
ggttcaaatgttcagtttgccgttgatccaaaaactggaagacaagttatcatagaaatg
aatccaagagtatcaaggagttctgctttagcctcaaaagctacaggatttccaattgcg
aaaatagcagcaaaattagctgtaggttatacacttgatgaaatccctaatgatattaca
aaaaagacccctgcgtgctttgaacccactatagattactgtgttgttaaatatccacga
tttacttttgaaaaatttcctggagctgacgatacgttgaccactcaaatgaaatctgtt
ggcgaagtaatggcaataggaagaacatttaaagaagcttttcaaaaagcaataaactct
cttgaaataggtaaaacaggttttgatgaaatttttagtgaagaagagttacaaaaggat
agtgttaaagatgaaattattagatttctcaaaagacctactgataaacgtgtattttat
atagctgaaagcttaagagcaggtttcactattgatgaaatatacaatttatcaaaaatt
gataagtggtttttagaaaatataaaagaaataatagattttgaaaaaaagataaaagaa
acaaaaaaattagatgaaaacacgctaatagaagcaaaaaagttaggtttttctgataaa
agattggcaaaactacttaatttaaaagaagaagatattagagaaaaaagaaatacttac
aatttaaaacctgtctacaaaagggtagatacttgtgccgctgaatttgaatcaaatact
ccatatatgtactccacatttgaagaagaatgtgaatcatacccaacaaacaataaaaaa
gttgtaatattaggtggtggaccaaatagaatagggcaggggatagaatttgattactgt
tgcgttcacgcatcatatgcacttagggaagtaggttatgaaactattatggtaaactgt
aacccagaaactgtgagtacagattatgacacatcagatagactctattttgaaccttta
acatttgaacatgtaatgaatattatcgaaaaagaaaacccttatggtgttatagtccaa
tttggtggtcaaactccattgaaattagcagtacctttagaaaaagcaggagtcaatata
ttaggtacttctcctgatagtattgatattgctgaagatagagaaagatttcaaaaactt
ttaaaagatataaacttgaaacaaccagataatggaatagccaaaaactttgaagaagct
ctaaatattgcagaaaatattggttatcctgtcgtagtaaggccttcctatgttttgggt
ggcagggctatggaaattgtttatgaccaggattcattaaaaaactatatgaaatatgca
gtggaagcaagtgaagaacatcccgtattaattgataaatttttagaaaatgccattgag
gtagatgttgatgctataagtgatggtgaatccacaatagtagcagggattatgcagcat
atagaagaagctggaatacattcaggtgattctgcttgctcaattccacctagatcatta
agtgatgagattatagaagaaatcaaaagggctactataagccttgcagaaaaattaaat
gttaaaggtttaatgaatgttcaatatgccataaaggataatcaactttacgtattagaa
gtaaatcctagggcatcaaggactgttccctacgtcagtaaatcgattggtaaatcatta
gcaaagttagcgtccaaagtgatggttggctacaagctaaaagatttaggttttacaaaa
gaagtaaacattccatattttacagtaaaagaatctgttttcccttttacaaagtttcca
gggacagatccaattttaggtccagagatgaaatctactggagaagtaatggggatagat
aaaacttttggaagggcatattataaagcacaaattgccgcaaacaattctttaccaaca
actggtacagttttcataagtgtcaaggatagagtaaaaaaagatatcttacctgttgca
aaaaagcttgaaaaacttggttttaaaattgtagctacaacaggtacatataagtttctg
agagaaaatggtataaatgctgaacatgtattaaaagtacaagaaggtagacctaatatt
gttgacctcataaaaagtgacaagattgatttcgttataaatgtgccagaaggtaaaaaa
tcaagacttgactcgaattcaatcagaagagttattttaaattacaatataccatatgta
acaacagtagaagcagcaatagcaagcgtaaatggagtagaagcatatctaaatgaaggc
ctatctgtgaaatcacttcaagaatactataaagaaattgtttattaa
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