Deferribacter desulfuricans: DEFDS_1346
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Entry
DEFDS_1346 CDS
T01188
Symbol
glcF
Name
(GenBank) glycolate oxidase, iron-sulfur subunit GlcF
KO
K11473
glycolate dehydrogenase iron-sulfur subunit [EC:
1.1.99.14
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00630
Glyoxylate and dicarboxylate metabolism
ddf01100
Metabolic pathways
ddf01110
Biosynthesis of secondary metabolites
ddf01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DEFDS_1346 (glcF)
Enzymes [BR:
ddf01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
DEFDS_1346 (glcF)
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Gene cluster
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Motif
Pfam:
CCG
Fer4_8
Fer4_7
Fer4_17
Fer4_10
Fer4
Fer4_6
Fer4_2
Fer4_9
Fer4_3
Fer4_21
Fer4_4
Fer4_22
p55_CTD
Motif
Other DBs
NCBI-ProteinID:
BAI80807
UniProt:
D3PDY4
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Position
complement(1356430..1357665)
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AA seq
411 aa
AA seq
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MKKIIEELKQIEDLIIKCMKCGTCQAYCPLYQKDFFEGSVARGKITLLESIYEGKIEDVD
NILKYLDYCILCGRCETNCPSGVKTTEIFLKGKSTLRKVSDLPVYQKLLLKVLLGKPDLM
SSLAPLFHVGFKLGTKKVKDDIYKPILEGFGNRYVKGIKKRFFTKEYGGVNKANNEKMKV
IFYPGCAINMIYFDWGEKIVKVLNKLGVTVIVPETNYCCGIPAATMGKQDMMKELLNKNY
DYFKSIDDVDYVITACPTCNHSLADMGINLGLKLPNVEFVDILIFLSRVLKVKVENIISD
KVTVHIPCHYNRDQVNDIFSFTSKLSSNFTPLENQNCCGFGGTFNLKHYDKSTVFSKDKG
EEVKKKDIKIMFTPCPGCAMNLTDGVMHVGAECSVMHPIEKIYEVIEKYVS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagataattgaagagttaaaacagatagaagatttaattattaaatgtatgaaa
tgtggtacatgtcaggcttattgtccactttatcagaaagatttttttgaaggatctgta
gcaagagggaagataacactgcttgagtcaatttatgaagggaaaattgaggatgtggat
aacattttgaaatatcttgattactgtattttgtgtggtaggtgtgaaactaattgtcca
agtggtgttaaaacaactgagatttttttgaaggggaaatcaacactaagaaaagtttca
gacttacctgtttatcaaaaacttctactaaaagttttacttggtaagccagatctaatg
agtagcttagcaccactttttcatgttggttttaaactagggactaagaaggtaaaagat
gatatatataaacctattttagaagggtttggaaatagatatgtgaaagggataaaaaag
agattttttacaaaggaatatggaggggtaaataaagcaaataatgaaaagatgaaagtc
attttttatcctggttgtgctattaacatgatttattttgattggggagaaaaaattgtc
aaagttttaaataagcttggtgtaactgtgattgttcctgaaactaattattgttgtgga
atacctgctgccacaatgggtaagcaggatatgatgaaagagttgttaaataaaaattat
gattattttaaaagtatagatgatgtggactatgtaataacggcttgtcctacctgcaat
cactctttagctgatatgggaataaacttaggtttaaaattaccaaatgttgaatttgtt
gatattttaatttttttatcaagagtattaaaagtaaaggttgaaaatataattagcgat
aaagttacagttcatatcccttgtcattacaatagggatcaggtaaatgatatattctct
tttacgtcaaaactatcttcaaattttacccctcttgaaaatcaaaattgctgtggtttt
ggtggaacctttaatttgaagcattatgataaatcaacagtattttcaaaagataaaggg
gaagaagtaaaaaagaaagatatcaagataatgtttacaccttgtccaggttgtgctatg
aatttgactgatggtgtgatgcatgtgggtgctgaatgctctgtgatgcatccaatagaa
aagatatatgaggttatagaaaagtatgtttcgtaa
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