Deferribacter desulfuricans: DEFDS_1409
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Entry
DEFDS_1409 CDS
T01188
Name
(GenBank) conserved hypothetical protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ddf
Deferribacter desulfuricans
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddf01011
]
DEFDS_1409
Enzymes [BR:
ddf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DEFDS_1409
Peptidoglycan biosynthesis and degradation proteins [BR:
ddf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DEFDS_1409
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
TPR_6
TPR_12
TPR_16
TPR_2
TPR_8
TPR_19
Phage_TAC_2
ACT_PSP_2
Motif
Other DBs
NCBI-ProteinID:
BAI80870
UniProt:
D3PE47
LinkDB
All DBs
Position
complement(1425736..1427304)
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AA seq
522 aa
AA seq
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MFRFCSKLVVLIFILVSFVYAENNNPNVSDILFARQSIAEGKYYVEVGKYLDALEFFETA
LETTNNRYIVSDALLQKATLFAHYMDKPEEAAKIYEEIFRKFPDLPQGETALYKLALLYN
DFGDEKKALEYFKLYLQYYPFGRFRYTASFFVERYTKKPLVSPKKKFELPPVNIKGAPDI
RVRLFKGKSTKIKGNLSIKDSSGRLILNINGVVSVFLSGKMVILNGRQFYSPVYIYPNSS
YLYLLKKDGYRGYRGYFKIFVSKGKLYVINILNIEDYLKSVVTSESPSSWPLETLKAQTV
AARTYALYQKLHREDWSYDVVDNEGDQAYNGIKNETKKGVRAVLETAGLVLTYRNRPILS
FFTASTGWYIDDPKYIFGTGYPYMRAKPDPYSAKEKMGRWTKKITLNEIGNYLRRKGVNI
GTIYSISPYKTTPAGRVVKVKINHSGGTKVLRTYTTVRRAAKLYDILFSIQQTGNSIIFK
GGGFGHGVGYSQWGGKALGEAGKRFDEILNFYYEGSVIKKMW
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgttcagattttgcagtaagttagtagttttaatttttatactcgtttcatttgtttat
gcagaaaataataatccaaatgtatctgatatcctttttgcaaggcaatccattgccgag
gggaaatactatgttgaagtgggcaaatatcttgatgcattagagttctttgagactgct
cttgagacaacgaataacaggtatatagtttctgatgctttacttcaaaaggcaacactt
tttgctcattacatggataaacctgaagaagctgcaaaaatatatgaagaaatttttaga
aaatttcctgatttaccacaaggtgaaacagccttatacaaattagcactgctttacaat
gactttggagatgaaaaaaaagctttagaatattttaagctttatttacaatattacccc
tttggacgctttcgttatacagcatcatttttcgtggaaagatatacaaagaaaccatta
gtatcccctaagaaaaagtttgaattgccacctgtaaatattaaaggtgctccagatatt
agggtaagattattcaaagggaaatcaactaaaataaaaggtaatctatcaattaaggat
agttcaggtaggttaattttaaatatcaatggggttgttagtgtttttttaagtggaaaa
atggtgattttgaacgggagacagttttattcgccggtttatatttatcctaacagttca
tatttatatcttttaaagaaggatggatatagaggatatcgaggttactttaagattttt
gtatctaagggtaaattatatgttatcaacatattaaatattgaagattacttgaaaagt
gttgttacaagtgagtctccaagcagctggcctttagagactttaaaggctcaaacagta
gctgcaaggacttatgcactttatcaaaaattgcatagagaagactggagttatgatgtt
gtagataatgaaggtgatcaagcctataacggtatcaaaaatgaaacaaaaaaaggtgtt
cgggcagtattggagactgctgggttggtgttgacataccgtaataggcctattttgtca
ttttttactgcaagtacaggttggtatattgatgatcctaaatatatctttggcacaggt
tatccatacatgcgtgctaagcctgacccatatagtgctaaggagaagatgggtagatgg
actaaaaaaattactttaaacgaaattgggaattatttgagaaggaaaggtgtaaatatt
gggacaatatattcaatatcaccctacaaaactacacctgctggtagagttgtaaaggtt
aaaattaaccactcaggcgggacaaaggtacttaggacttacactactgtaagaagagct
gcaaagttgtatgatatattatttagtattcaacaaactggtaattctataatttttaaa
ggtggtggttttggtcatggcgttggttattcccagtggggtggaaaagcattgggagag
gcaggaaaaagatttgacgaaatactaaatttttattatgaaggttcagttataaaaaaa
atgtggtga
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