Deferribacter desulfuricans: DEFDS_1427
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Entry
DEFDS_1427 CDS
T01188
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DEFDS_1427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddf03021
]
DEFDS_1427
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_1427
Enzymes [BR:
ddf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DEFDS_1427
Transcription machinery [BR:
ddf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DEFDS_1427
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DEFDS_1427
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAI80887
UniProt:
D3PE64
LinkDB
All DBs
Position
complement(1441487..1441708)
Genome browser
AA seq
73 aa
AA seq
DB search
MAFLNIEKGVNREDVKSRFKLSLVASQRARELYENKEGTVPPQVEGYYKNVTIALAEIIE
NKITFEEEQEQDE
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atggcttttttaaatattgaaaagggtgtaaatagagaagatgttaagagtaggtttaag
ttatcattggtggctagccaaagagctagggagttgtatgagaataaggaaggtacagtt
ccacctcaggtagaaggttattataaaaatgttacgatagctttagctgaaataattgaa
aataaaattacctttgaagaggaacaagagcaggatgagtaa
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