Deferribacter desulfuricans: DEFDS_1522
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Entry
DEFDS_1522 CDS
T01188
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ddf
Deferribacter desulfuricans
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddf03016
]
DEFDS_1522 (truB)
Enzymes [BR:
ddf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DEFDS_1522 (truB)
Transfer RNA biogenesis [BR:
ddf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DEFDS_1522 (truB)
Prokaryotic type
DEFDS_1522 (truB)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BAI80982
UniProt:
D3PEF9
LinkDB
All DBs
Position
complement(1543062..1543958)
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AA seq
298 aa
AA seq
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MILNGIVVLYKEKNISSFKAIDKLRKILNVKKCGHTGTLDPIAEGVLPVCLNKATKLIKY
LNENEKEYIAELRLGIKTDTFDITGETIDENSDNIPLKEEINNVLSGMIGNIELPVPKFS
AVKINGERAYKLARENKDFDAGTRISIIYHIELIDYSYPNCVIKILCSRGTYVRSFINEL
GNRLGCFATMTNLLRTKSGVFNIKQSYKLEQIEEMIKNDDYSFMLDIKEVLNFPVAVVKD
EFLKLAKNGGKLRRTMYLKFPLTQDYNHYFMSDIKGNIFAIAKKVEGSVYPLKIEHVL
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgattcttaacggcattgtagtcttatataaagaaaaaaatatcagctcatttaaagcg
attgataaactaagaaaaattttaaatgtgaagaagtgtggccatacgggtacgcttgat
ccgattgcggaaggtgttttacctgtgtgtttgaacaaagcaactaagcttatcaaatac
ttaaatgaaaatgaaaaagagtatatagctgaactaagattggggattaaaacagataca
tttgatattactggtgaaactattgatgaaaatagtgataatattcccttaaaagaggaa
ataaataatgttttatctgggatgattggtaatatagagcttcctgtgccaaaattttca
gcagtgaaaataaatggtgaaagagcttataaattagctagagaaaataaagattttgat
gctggtactcgtatttcaattatttatcatatagaattgatagattatagttatccaaac
tgtgtaattaaaatattgtgctcaagaggtacgtatgtaagaagttttataaatgagcta
ggtaataggcttgggtgttttgctacaatgactaatttattaaggactaaaagtggtgtg
tttaatataaagcaatcctataagcttgagcaaattgaggaaatgattaagaatgatgat
tactcttttatgcttgatattaaagaagttttaaattttccagtagcggttgtaaaagat
gagtttttaaaacttgctaaaaatggggggaaacttagaaggacaatgtatttaaaattt
ccacttacgcaagattataatcattattttatgtctgatataaaagggaatatttttgct
attgcaaaaaaagttgaaggttctgtttatccgttaaagattgagcatgtgttataa
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