Deferribacter desulfuricans: DEFDS_1745
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Entry
DEFDS_1745 CDS
T01188
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DEFDS_1745 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddf03021
]
DEFDS_1745 (rpoA)
03400 DNA repair and recombination proteins [BR:
ddf03400
]
DEFDS_1745 (rpoA)
Enzymes [BR:
ddf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DEFDS_1745 (rpoA)
Transcription machinery [BR:
ddf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DEFDS_1745 (rpoA)
DNA repair and recombination proteins [BR:
ddf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DEFDS_1745 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
Phe_hydrox_dim
FhbB
Mg_chelatase_C
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
BAI81200
UniProt:
D3P910
LinkDB
All DBs
Position
complement(1771346..1772362)
Genome browser
AA seq
338 aa
AA seq
DB search
MVLMDFRKVMKPKKIEQIGEATDRYAKFVIEPYERGFGITIGNSLRRVLLSTIEGTAVVG
VKIDGVHHEYDTINGVLEDVVDIILNIKQLELNLLEHTLKRVYIHKKGEGRITANDIQSD
GSVVVLNPDQHIATITNPETEVYMELYVERGIGYVPSEEIKDKFDDIDVIPVDAIYTPIK
KVNYVVENARVGQSTDYDKLIFELETDGSIKPVDAIAFAAKIIKDQMEFFINFDEPVYEE
VEEEEKEDNSYILELLDKSIEELELSVRAYNCLKNANIKTLADLCEKTDAELLKTKNFGR
RSLEEIKKVLAELGLSLGMDLEAVGYIKKEVEGEEDAS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggttttaatggattttagaaaagtaatgaagccaaagaagattgagcaaattggagaa
gctacagacagatatgctaaatttgttatagaaccatacgaaagaggttttggtataaca
ataggtaattcgttgagacgtgttttgctctctactattgaagggacagcggtagtaggt
gtaaaaatagatggtgtccatcatgagtatgatactataaatggtgttttggaagatgtt
gttgatataattttaaatatcaagcaactcgagttaaatctattggagcatacactaaag
cgtgtctatattcataaaaaaggggaaggcagaattactgctaatgatattcaaagcgat
ggtagtgtagtggttttaaaccctgatcaacatatagcaactataactaaccctgaaact
gaagtttatatggaattgtatgtagaacgtggtattggatacgttccatcagaagagatt
aaagataaatttgatgatattgatgttatccctgtagacgcaatttatactcctattaaa
aaggtaaattatgttgttgaaaatgccagggttggtcaaagtacagattatgacaagtta
atttttgagcttgaaacagatggttctattaaacccgtagatgcgatagcttttgcagct
aaaattataaaagatcagatggaattttttattaattttgatgaacctgtgtatgaagag
gttgaagaggaagaaaaagaagataacagctatattttagagttgttagataaaagtatt
gaagaacttgaattgtctgtaagagcttataattgtttaaaaaacgctaatataaaaaca
cttgctgatctgtgtgagaaaacagatgcagaacttttaaaaactaaaaattttggtaga
aggtcattagaagagattaaaaaggtattggccgaattaggtttaagcctcggaatggat
ttagaggctgttgggtatattaaaaaagaagttgagggagaagaagatgcgtcatag
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