Deferribacter desulfuricans: DEFDS_1924
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Entry
DEFDS_1924 CDS
T01188
Name
(GenBank) DNA-directed RNA polymerase sigma 70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DEFDS_1924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddf03021
]
DEFDS_1924
Transcription machinery [BR:
ddf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DEFDS_1924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HTH_25
GerE
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BAI81375
UniProt:
D3P9I5
LinkDB
All DBs
Position
complement(1949888..1950829)
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AA seq
313 aa
AA seq
DB search
MVINGGGMEDINTDKNKELVEIDESLDEKDFVEIPLITDISEDGLKNYLNRISQFQPLSR
EEEYELGKRIQQGDKKALEKLVLSNLKFVVSIANRYKNTGLPLADIINQGNLGLLEAAKR
FDPERGVKFISYAVWWIRQAIIQALAEQSGTVKLPLKQASILYKINEAIEVLSKELGREP
TPDEIAVYLDMDPADIENVLRVSRNYLSLEAPIKDGEDRAFIDLLESGGKSVEEEIFLNT
LKANIEEIVDELNEREAQIIKWRFGLEGETPKTLEEIGEILNISRERVRQIEARALNKLK
KKALKRKLNDFLN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttggtgataaatggtgggggtatggaagatataaatactgataaaaataaagagttagta
gaaatagatgaatctttagatgaaaaagattttgttgaaatacctttgattactgatatt
tctgaggatggtttaaagaactatcttaatcgtatatctcaatttcagcctttgagtaga
gaagaggagtatgaattaggtaaaaggattcagcaaggggataaaaaagcccttgaaaag
ttggtgttatcgaacttgaaatttgtggtatcaattgcaaataggtataaaaatactgga
ttgcctcttgctgatataattaatcaagggaatcttggactacttgaagctgccaaaagg
tttgatcctgagcgtggtgtaaaatttatatcttatgcagtatggtggattagacaggct
attatccaagctcttgcagaacaatctggtactgtaaaactgcctttaaaacaggcaagt
attctttacaaaattaatgaagctatagaagttttgagtaaagagctggggagagaaccc
actccggatgagatagcagtgtatttagatatggatcctgcagatattgagaatgttttg
agagtttcgagaaattatctttctttagaagcgcctataaaagatggtgaagatcgagct
tttatagatttattagagtcaggtggaaaaagtgttgaagaagagatttttttaaacact
ctaaaggcaaatatagaagagattgtcgatgaattaaatgagagagaagctcagataata
aaatggagatttgggttagaaggggaaactccaaaaactttagaagagattggggaaatc
ttgaatatcagtagagagagggttcgtcagattgaagctagggcattaaataagcttaaa
aagaaggcattgaagagaaagttaaatgactttttaaattag
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