Desulfitobacterium dehalogenans: Desde_0210
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Entry
Desde_0210 CDS
T02146
Name
(GenBank) DNA mismatch repair protein, MutS family
KO
K07456
DNA mismatch repair protein MutS2
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Desde_0210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_0210
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Desde_0210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFL98690
UniProt:
I4A406
LinkDB
All DBs
Position
207563..209932
Genome browser
AA seq
789 aa
AA seq
DB search
MVLNERVIKKLDFDKILERLASQCIMLRARELVEQLKPYPHLDLVRGALEETGEGKSILR
INPLFSVRGAREIRPYLERCLKGGTLTPDELLHIRDTLKAARIIKQSLQEGKTEVPHLKG
IMEQVILPKGIEEEITRCITEDGQVADQASPALADLRRGVSRLQTRIRETLDGIIRNPAY
QKILQDPIITQRSERYVVPVKQEYRQSFPGIVHDQSASGATLYIEPMAVVNLGNELREVV
LKEQREVQRILLLLSSRVEGEAEAIADAHEALARVDFILAKARLSEEMNAGAPVLTEKQE
ISLVQARHPLLTGKVVPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLLAAMAQCGLHIP
AESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVQKADRRSLILLDEVGAGTD
PTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFDSESLRPTYRLL
VGIPGKSNAFYIAGRLGLPEGVLDRARTFVTEREMQVADLIENLEDTQREIDLEKRRARE
ERQAIEKESIGLKEKSQKLEDEYQELMAMAKDQAVEIVREARREAERLIDELKLALKEER
KDQQAIERTRQGIRKLSNKVGEQDTPARATQGVDPQEIKLGQMVYMTKLRQKGQVLKLPN
ASGEIFVQAGVIKLNVPLSEIRLIQEEKVAKPTRSVGGQGKVGMKKAETIRTEIDLRGMM
VEEASYELDKYLDDAVLTGVGQVYVIHGKGTGALRLGIHEFLRGHHHVKSFRLGQHGEGD
LGVTVVELK
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggtactcaatgaacgggtaattaagaaactcgacttcgataaaatcttagaacggctt
gccagccagtgcattatgctccgggctcgggaattggtagaacagttaaagccctatcct
catctggatttggtgcggggggccctggaggaaaccggtgaaggcaagagtatactgagg
attaatccgcttttttcggtacggggagctcgagaaattcgaccctatctggaacggtgc
ttaaagggagggaccttaacaccggatgagctgctgcatattcgggatactttaaaagca
gcccgcatcataaagcaaagtcttcaagaagggaaaacagaggttcctcatcttaaagga
atcatggagcaggttattctgcccaagggtatagaggaggagattacccgctgtattacg
gaggatggtcaggtagcggatcaagcttcccccgctttggcggatttgcgccggggtgtt
tcccgcttgcagacgaggataagggaaactttagatggaatcattcgcaaccccgcctac
caaaagattctccaggatcctattattacccagcgctcggagcgctatgtagtcccggtc
aagcaggaatatcgccaatcctttccgggcatcgtccatgatcaatcggccagtggggcg
accctctatattgaacccatggctgtggtcaacttgggaaatgagctgcgggaagtcgtt
cttaaggaacaaagggaggtccagcggattcttttactcctctcatcccgtgtggaaggg
gaagcagaagccattgccgatgctcatgaagctctggcccgggtggatttcattctagct
aaagcgcggctcagtgaggaaatgaatgcaggagctccggttcttaccgaaaagcaggag
ataagccttgttcaggcacggcatcctctccttacgggaaaagtggtacccttaactatc
caattagggactcgctttgatacagtggtggtcaccggccccaataccggcggaaaaacg
gtagcgttgaaaaccattggactcttggcagctatggcgcagtgcggcttgcatattcct
gccgaatcggactcccgggtgggggtttttacccagatctttgcagatattggggatgag
cagagtgtggaacagtccttaagtaccttcagtggccatatgaaaaatattgtcgagatt
gtgcaaaaagcagaccggcgctccctcatcctgcttgatgaagtgggagcgggtaccgac
cctacggaaggttctgcactggctatggcgataatcgctgaacttcatgaacggggagca
agaattgtagccaccacccactatggagctttaaagaattttgcctataatacgacccgg
gtagaaaatgcttctgtagaatttgactcggaatccctaaggcctacgtatcgcttgctg
gtaggtattcccggcaaaagcaatgccttttatatcgccggacggctgggattgccggaa
ggggttttggacagggcgcgaaccttcgttacagagcgggaaatgcaggtagctgattta
atcgaaaaccttgaggatactcaacgggagattgatttggaaaaacgccgggcgcgtgag
gagcgtcaggctattgagaaagaaagtattggcctgaaggagaaatcccaaaagctggag
gacgagtatcaggagcttatggccatggccaaagatcaggccgtagagattgtccgggaa
gcaaggagagaagcggagaggcttattgatgagctgaagcttgcccttaaagaggagcga
aaggatcaacaagctattgaacggacccgtcaagggattcgtaaattatccaataaggtg
ggagaacaagatactccggctagagccactcagggagtggacccccaagagattaaattg
ggacagatggtgtatatgaccaagctccggcaaaaaggacaggtccttaagcttcccaat
gcttcaggggagattttcgtccaggcaggagtgatcaagctgaatgtccctctcagtgaa
atccggctgatccaggaagagaaggtggccaagcccacccgatccgtaggcggacaggga
aaagtcggtatgaaaaaagccgaaaccattcgtacggaaatcgatctacgggggatgatg
gtggaagaggccagctatgaattggataaatacttggatgacgccgtactaacaggtgtt
ggccaagtttacgtcattcatggaaaagggacaggagccttaagactggggattcatgaa
ttcctgcgtgggcatcaccatgtcaaatccttccgcttagggcagcatggggaaggggat
cttggagtaaccgtcgtcgaattaaaataa
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