Desulfitobacterium dehalogenans: Desde_0933
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Entry
Desde_0933 CDS
T02146
Name
(GenBank) transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ddh
Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddh03000
]
Desde_0933
Transcription factors [BR:
ddh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desde_0933
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_2
Mg_chelatase
AAA_3
HTH_50
HTH_30
AAA_16
IstB_IS21
PAS_4
AAA_7
Zeta_toxin
DUF815
TIP49
HTH_28
HTH_7
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AFL99369
UniProt:
I4A5Y5
LinkDB
All DBs
Position
complement(952519..954498)
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AA seq
659 aa
AA seq
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MHYTQEGILEAWKNFVIRGVIQEDNVHPSVARSWERCRNLGLDPWSTEFPKCNTSLLQEK
RIQYAELLSLAAPVMNYLYALLDCNISICDSDGFVFELITPIKNYPRTLGAYTDEATCGN
GAVTIALKEKIPMRTDGYEHYRIISQNHSGVSSPIMINNTLVAVLNGVNPFGSLHDNALS
MTITAAKIIEYYLTAGPKSTKPLELKPLIKEMIDDCSCLVVVLEHDGTIHTANQIFASSF
TGSDTTGKSLGSYLPNKNDLARLMANNYEQPSEEIEFKADFATHKRETLRCRLLRKQHIR
LLNGEVHTLLIFKKQGSAEQKVNHSSPSCSPVSISHKLSKPHEIDYIGESTTWSKVDSIV
QKTAKFPSNVLLLGETGTGKEVVAKAIHQRSGRKGNFVAINCGALPKDLLHSELFGYEEG
AFTGARAHGSIGKFEHAHEGTLLLDEIGEMPLDMQVTLLRFLQERTITRISSNKPKKVDV
RIIAATNTDMAELVRLGQFRQDLYYRLNVIEINLPPLRERKCDIPLLAEHFISELSRQYN
VQSKQIHPAALQILCSYDWPGNVRELKNVIEKAMILSEGLEITPEFLPEYILHSQNTTSQ
SKLFTPQNGESERERIINLLESYNGNIFQAAKALKMSRNTLYRKMEKYNIQLKTSAVKK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcattatacccaggaaggaattcttgaggcttggaagaactttgtgatccgcggagtg
atccaggaagacaacgttcatccttctgtggcccgatcatgggaacggtgccggaatctt
ggccttgatccatggtccacggaatttcctaaatgcaatacctccttgttgcaggaaaaa
agaattcaatatgcagaattgctgtctttagcggctccggtcatgaactatctttatgcc
ttgctggattgcaacataagcatctgtgattctgacggttttgtttttgagttaattacc
ccgatcaaaaactacccccgaactttaggagcctataccgatgaagcgacttgtggaaac
ggcgctgttaccatcgctttaaaagaaaaaatccctatgagaaccgatggatatgagcat
taccgcattatcagccagaaccattccggcgtgagttctcctatcatgatcaacaacacc
ttggttgcagttctcaatggagtcaatccctttggcagccttcacgataatgccctttcc
atgactatcactgcagctaaaattatagagtattatctgacggcaggacccaaatcaact
aagccccttgaactcaaacctctgatcaaagaaatgatcgatgattgctcctgcttggtt
gttgttctggagcatgatgggacaatccatacagcaaaccaaatcttcgccagctctttt
accggctccgacacgaccggcaaatccttagggagctatcttcctaacaaaaatgatttg
gctcgtctcatggccaacaattacgagcaacccagtgaagaaattgagtttaaagcggat
ttcgcaacccataaaagagaaaccctccgctgccggctgctcagaaaacagcatatccgg
cttcttaacggtgaagtccataccctgcttattttcaaaaagcaaggctcagccgagcaa
aaagttaaccattccagtccctcctgctctcccgtttctatttcccataagctctccaag
cctcatgagattgactatattggtgaaagcaccacttggtccaaagtggacagcattgtt
caaaaaaccgccaaattcccttcgaatgtgctgctgcttggggaaaccgggacgggcaaa
gaagtggtggctaaggccattcatcagcgcagcggccggaaaggcaattttgtagctatc
aattgcggggcactgccgaaggatttactccatagtgaactcttcggctatgaagaaggc
gcttttaccggtgcccgtgcccatggttccatcggaaaattcgaacatgctcacgaagga
accttgcttctggatgaaataggtgaaatgcctctggacatgcaggtaactcttctgaga
tttctccaggagcgaaccattacgcggattagctccaataaacctaaaaaagtggatgtg
cgcattatcgccgcaaccaatacagatatggctgaactcgtcagactggggcaatttcgt
caggatctctattatcggctcaatgtcattgagatcaaccttccgccgctccgtgaacga
aaatgcgatattcctttattggcagaacattttatatccgaattgtccagacaatacaac
gtccaatccaagcaaatccatccggctgctctccaaatcctttgcagctatgattggccg
ggaaatgtcagggaattaaaaaacgttatcgaaaaagcaatgattttgtccgaaggcctg
gaaatcactcccgaattcttacccgaatatattttgcattctcaaaatacgacctctcaa
tccaaactatttactccgcagaatggggaatctgaacgcgaacgcatcattaacttatta
gaaagttataacggcaatatcttccaagcggcaaaagctttaaaaatgtcccgcaatacc
ttataccgcaagatggaaaaatataatattcaattaaaaacttcagcagtcaaaaaataa
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