Desulfitobacterium dehalogenans: Desde_1819
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Entry
Desde_1819 CDS
T02146
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desde_1819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_1819
Enzymes [BR:
ddh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Desde_1819
DNA repair and recombination proteins [BR:
ddh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desde_1819
Prokaryotic type
Desde_1819
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
AFM00215
UniProt:
I4A8D0
LinkDB
All DBs
Position
complement(1834715..1835389)
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AA seq
224 aa
AA seq
DB search
MQILKNDWHELLKDEFQQEYYQKLRKYLVQEYRTRTIYPDMYDIFNALHFTPYKGVKVVI
LGQDPYHGPNQAHGLSFSVKPGVPAPPSLQNIFKELQDDLGCRIPNHGYLKQWADQGVLL
LNTSLTVRASQANSHAQIGWHQFTDKVIFLLNQRQEPVVFILWGKNAQTKQSIITNPQHF
IIKSVHPSPLSAYGGFFGSKPFSKANNFLVSQGKESIDWQIEDL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatattgaaaaatgattggcacgaattattaaaggatgaatttcagcaggaatat
tatcaaaagctgagaaagtatttggtacaggagtaccgaacccgaactatatatcccgat
atgtacgacatttttaatgccctgcattttaccccttataaaggtgtaaaagtggtcatc
ctggggcaagacccctaccatggtccgaaccaagcccatggattaagcttttctgttaaa
cccggtgtaccggctccgccctccctgcaaaatatctttaaagaattgcaggacgatctt
ggatgtaggattcccaaccatggttacctcaaacaatgggcagatcagggggttttactc
ctgaacacttccctgaccgttcgcgccagtcaggccaattcccatgctcagataggatgg
catcaatttacggataaagtgatcttcctcttgaatcagcgccaagagcccgtggtgttt
atcctttggggaaaaaatgcgcagaccaagcaaagtattatcactaatcctcaacatttc
attataaaatccgttcatcccagcccactctctgcttatggtggattttttggcagcaag
cctttttctaaggccaataactttttagtatcccaaggtaaggaatccattgattggcag
attgaagatctctga
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