Desulfitobacterium dehalogenans: Desde_1925
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Entry
Desde_1925 CDS
T02146
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03030
DNA replication
ddh03430
Mismatch repair
ddh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Desde_1925
03430 Mismatch repair
Desde_1925
03440 Homologous recombination
Desde_1925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddh03032
]
Desde_1925
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_1925
Enzymes [BR:
ddh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Desde_1925
DNA replication proteins [BR:
ddh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Desde_1925
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Desde_1925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
DUF655
RMI2
Motif
Other DBs
NCBI-ProteinID:
AFM00315
UniProt:
I4A8N0
LinkDB
All DBs
Position
1955078..1958566
Genome browser
AA seq
1162 aa
AA seq
DB search
MGFVHLHVHTEYSLLDGAARIERLVNKAVELGMPAVAITDHGVMYGIIDFYKACKKAGIK
PIIGCEVYVAPHRRTERVPGRDDNNRHLVLLAENEEGYKNLIKLVSTAHVDGFYYKPRVD
KDILRKHSRGLIALSACLAGEVSEYLMNNQLETAVQSALEYEEIFGKGNFYLEVQNHGLE
EQQRVNTGMFEVQRRTGIPMVATNDVHYVRKEDAFIQDVLICIQTGKNLTDSSRMSFSSE
EFFLKSEAEMSLLFGEHPEILENTVRIAERCQVDFKFGDHYLPVFEVPEGYTLDTYLRKK
CYEAFPLFYPNQKAEEKERLDYELDVISQTGFSGYFLIVADFCQYARGNGIAVGPGRGSA
AASMVAYLMEITTVEPMQHDLLFERFLNPERVSMPDIDIDFDPEGRERVISYVTEKYGSD
KVCQIITFGTMGAKAAIRDVGRVLGIPLARVDKVAKAIPSDLGMTLEKALTVSPDLVKLT
EEDGEIKKLYEIARSIEGMPRHASTHAAGVVIAKDSLDTYIPLQRTSDGGFTMTQFPMKT
VEEVGLLKMDFLGLRNLTIIQEALKQIQGNRGEVLDLQSLPLDDKATFDMLSLGNSTGVF
QLESGGMRNVLKELKPSCFEDIIAVVALFRPGPMEQIPEFIRRKHGGAVSFLHPLLEPIL
RSTYGVIVYQEQVMQIARDLAGYSLGRADLLRRAMGKKKKEIMEEERQSFIYGLQSPTGE
EIIPGALKLGLTEKEAEEIFDLMAKFAEYGFNKGHATAYAVIAYQTAYLKANYPLEFNAA
LISTVMNSADKVSFYIHEARQSGIKILPPDVQHSLVGFSIEGRGIRFGLGAIRNVGVNVV
EKIIEARQEGPFESLYDFCIRVDAKVLNKRVLESLLKAGAFNSLCKRAQGLLALDSVLEM
AQQRQRDKESGQFSLFDFGDDLDEGIDLPDVEEYSPRELLTMEKEYLGLYLSGHPLDSLL
PKLRNATSEDILSCLEGDEEKKVILGGIVTGYRTTVTKRGEMMASFVLEDLTGTIEVLVF
PRIFAQSARLTEDQVVVVEGRYTIRDDERKIFAERITDLENAAERAQPTGHKEYGKKPLN
SKGVPSRKLYLRFPCEGTPLLEETLPILRHYSGTHPVLFFFEQDKKLVQGNRELWVNDLE
ELVQALSNILGESNVVWKVHTM
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgttcacctccacgtccatacggaatacagccttcttgacggggcggcccgg
attgaaagactggttaataaggccgtcgagctggggatgccggcagtggctattaccgat
cacggcgtcatgtatggaattattgatttttacaaagcctgcaagaaggccggtattaaa
cccatcatcggctgtgaagtctatgtggcccctcatcggcggacggagagagtgccgggc
cgggatgataacaaccgccatctggtgctgctggctgaaaatgaagaagggtacaaaaac
ctcattaagcttgtgtccacggctcatgtggacggcttttactataagccccgggtggac
aaggatatcttaagaaagcatagccggggactcattgccttaagcgcttgtttagcgggg
gaagtctcggagtatctcatgaataatcagctggaaacagcggtgcagagtgccctggag
tatgaagagatcttcggcaaggggaacttctacttggaagttcaaaaccatgggctggag
gagcagcagcgggttaatacgggaatgtttgaggttcagcggcgaacaggaattcctatg
gttgccaccaacgacgtgcattacgtcaggaaagaggatgcctttatccaggatgtgctc
atctgcattcagaccgggaagaacctcaccgattccagccgtatgagcttttccagtgag
gagtttttcttgaaatcggaagcggagatgagcctgcttttcggagagcatccggagatt
ctggagaacacggtccggatcgcggaacgctgtcaggtggatttcaaatttggtgaccat
tatttgccggtctttgaggttccggaagggtataccctggatacttatctgaggaaaaaa
tgctatgaagcttttccgcttttctaccctaaccaaaaagccgaagagaaggaacggctg
gactatgagctggacgtgatctctcaaacgggattctccggttatttcctgatcgtggcg
gacttttgtcagtatgcccgggggaatggtatcgctgtaggaccgggccggggttcggcg
gccgccagtatggtcgcttatctgatggaaattaccactgtagagcccatgcagcatgat
ttgctttttgagcggtttttgaatccggagcgggtaagcatgccggatattgatatagac
tttgacccggaaggccgggagcgggtgatcagctatgtcacggagaaatacggctcggac
aaagtctgccagatcatcacttttggaaccatgggagccaaagcggcgattcgtgatgtc
ggtcgggtgctgggaattccccttgcccgggtggacaaagtggctaaagccatccccagc
gatttagggatgaccttggaaaaagccctgaccgtctcccccgatctggtgaagctcacc
gaagaggatggggagattaaaaaactctatgaaatcgcccgttctatcgagggaatgccc
cgccatgcttccacccatgcggcaggtgtggtgatcgccaaggattccctggacacctat
atccccttgcaaaggacttccgacgggggcttcaccatgacccaattccccatgaagacg
gtggaagaagtgggccttctcaaaatggacttcctggggctgcgcaacctgaccattatc
caggaggctttgaagcaaattcaggggaatcggggggaagtcctggatctgcagagtctg
cccctggatgataaagccaccttcgatatgctttccctgggcaacagcaccggggttttc
caactggaaagcgggggaatgcgcaatgtccttaaggaactgaagccttcctgttttgaa
gatatcatcgcggtggtggctttattccgtcccggccccatggagcagattcctgaattt
atccgccgcaagcacggcggggccgtctctttcctgcatcccctgctggagcccatcctg
agaagcacctatggggttatcgtttaccaggagcaggttatgcagattgcccgggattta
gcaggttattctctgggacgagcggatttgctcaggcgggcgatggggaaaaagaaaaaa
gagatcatggaagaagagcggcaaagctttatctatggtttgcaaagccccaccggggaa
gagattatccccggcgccttaaaactcggtcttacggaaaaggaagccgaggagatcttt
gatttgatggctaagtttgccgaatatggctttaataaaggtcatgccacggcctatgcg
gtgattgcttatcagacagcctatcttaaagccaactatcctctggaatttaatgcggct
ttaatcagcaccgtcatgaattcggcggacaaggtgtccttttatattcatgaagcccgg
caaagcgggatcaagatcctccctccggatgttcagcatagtctggtgggcttcagcatc
gagggccgaggcattcgctttggcttaggggctatccgcaatgtgggtgtcaatgtggtg
gagaagattattgaggcccgccaggagggtccttttgaatctctctatgatttctgcatt
cgcgtggatgctaaggttctgaataagcgggtcctggaaagcttgctgaaagccggggcc
tttaactcactgtgtaaaagagctcaagggcttttagccctggattctgtcctggaaatg
gctcaacagcgccagagggacaaggaaagcggccagttttccctgtttgattttggggat
gacctggatgaagggattgacctccctgatgtcgaagagtattctccgcgagaactcctc
accatggaaaaggaatatcttggtctttatctcagcggtcaccctctcgatagccttctt
cccaaattgagaaatgctacttcagaggatattttgagctgtctcgaaggagatgaggaa
aagaaggtcatcctgggtggaatcgtcaccggctaccgtaccacagtgaccaaacggggg
gaaatgatggccagctttgtactggaggatttaaccggaaccatagaagttttggtgttc
ccacggatttttgctcaaagtgcccggttgacggaggatcaggtcgtggtggttgaggga
agatacactatccgggatgatgaacgcaagatttttgcggagcggatcacggacttggag
aatgcagcagagagggcacaacccacaggacataaggaatatgggaaaaagcctttaaac
tccaagggagtgccttcccggaaactttacttaagatttccctgtgaagggacccccctt
cttgaagagactctgccgatactacgtcattattcgggaacccatccggtgctcttcttt
tttgagcaggataaaaagctggttcaagggaaccgggaactttgggtgaatgatttagag
gaattggttcaggccttgtcaaacatactaggggaaagcaatgtcgtatggaaagtccat
accatgtaa
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