Desulfitobacterium dehalogenans: Desde_2179
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Entry
Desde_2179 CDS
T02146
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh00550
Peptidoglycan biosynthesis
ddh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desde_2179
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ddh01002
]
Desde_2179
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Desde_2179
Enzymes [BR:
ddh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Desde_2179
Peptidases and inhibitors [BR:
ddh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Desde_2179
Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Desde_2179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
Peptidase_S13
DUF1131
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
AFM00525
UniProt:
I4A990
LinkDB
All DBs
Position
complement(2185784..2186830)
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AA seq
348 aa
AA seq
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MSKKSKKRIPFTLLTIIITAIIVLTFFPGLLDRTGLADTLHTLSSSPSINKSDPVTKDAE
KTSPNTPGTSPAQFSDTPEYNPPEDSSYLMLNLRTGERLLEKNGDTRRAPASTVKLLTGL
LVHEKLQEDELITLGEEVKVEGSVLGLKPGDKILVKDLFTAMYVFSANDAASALAVAAYG
SMDDFIQAMNRYALELGCTDSQFKTANGMPAQDQYTTAKDLAIIASKFTENPTLMDYVKQ
KKASVNWTDANGWKQVREISNTNQLLGIYPGDQGLKTGTTTEAGQCLVTYVTMGDGDLLL
VLLGSEQRYTDTVELLDQGIAKIRTRAALKNILSSPEAFYNMPGFFAP
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaatcaaagaaaagaattccctttacgcttttaacgattatcatcacagcg
ataatcgttttaaccttttttccaggtttgttggaccgaacaggtttagcggataccctc
cataccctaagttccagtccatcaattaacaaaagcgatcctgttacaaaggatgcagaa
aagactagcccaaacacacccggaacttctcctgctcaattttcggatacccctgaatat
aatccgcctgaagactccagttatcttatgcttaacctaagaacaggggagaggcttctg
gagaaaaacggagatacacgccgagcacccgccagcacagtaaaacttttaactgggctt
cttgttcatgaaaaacttcaagaggatgagctcattaccttaggagaagaagtcaaggtc
gaaggatctgtacttggccttaagcctggtgataagatacttgtaaaagacttatttaca
gcaatgtatgtattcagtgccaatgatgcggctagtgcgttagctgtggcagcttatggt
tccatggatgactttattcaggctatgaaccggtatgcccttgaactcggctgtacggat
agtcagtttaagacggccaatggcatgccggcacaagatcaatacaccacggcaaaagat
ttagccatcattgcctcaaaattcacggagaatccaactctcatggattatgttaagcaa
aaaaaggcatctgtaaactggactgatgccaacggatggaaacaggttcgggaaatctct
aacacaaatcaacttttaggtatttatccgggagatcaaggccttaaaacaggaaccacc
actgaagcgggccagtgccttgttacatatgtcacaatgggggatggagacctcttattg
gtcctattaggcagtgagcagcgttatacggacacagttgagttattggatcaaggaata
gctaagatacgaacacgggcggcattaaaaaatatcttaagcagtccggaggcattttat
aatatgccgggatttttcgcaccatag
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