Desulfitobacterium dehalogenans: Desde_2604
Help
Entry
Desde_2604 CDS
T02146
Name
(GenBank) transcriptional activator of acetoin/glycerol metabolism
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
ddh
Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ddh03000
]
Desde_2604
Transcription factors [BR:
ddh03000
]
Prokaryotic type
Helix-turn-helix
Other families
Desde_2604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
Mg_chelatase
PAS
AAA_2
Diguanyl_cycl_sensor
PAS_9
HTH_50
AAA
nSTAND3
HTH_20
HTH_28
AAA_3
HTH_11
HTH_23
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AFM00934
UniProt:
I4AAE9
LinkDB
All DBs
Position
2617720..2619606
Genome browser
AA seq
628 aa
AA seq
DB search
MPQENWLRFVNGEPVVQDITPLIYRSWERSLGHNINPTVISHNKFLNDSDLRELRESRED
LIRAASSVLPFLFQLLNSCSNFSILLGDKDAFILESLGEGPFLSKAQRIFLSPGGNWGED
VKGTNAIGTALVEDMPVTIHGVEHYVQENHFLTCSAVPIHELNGEVIGVIDISSEIGNQD
CTLDIALTGARLIEQNLRNLTIERELKFYKQGTKLALDLLKEGFLSVDRHGMITQINSLG
ASLIGLKKEDLLGRHVADVLGAPKGWLLNQDILDLRHKDSKGHEVVTHFQRISDNSGNSL
GAVGVIQIHEQKMDGLGWVGRTSLKSQVILEKAHKAAQTNFSVLLQGQTGTGKEIIARMI
HELSLRRNGPFIALNCAAIPSTLLESELFGYADGAFTGARRGGQPGKFELAHEGTIFLDE
IGDMPLNAQVALLRLLQEKSLTRIGGKTIQKIDVRVITASHKDLKALVDANAFRHDLFYR
LKVVSIDLPPLVQRLEDLPELVTHFIHKACAAIGRPIIEIDDQIHPYFYSYSWPGNVREL
ENCIAGMVAMCTDSMLTVDDLPKEVRESLSEKDGSEPISMLAHQTRQMILQALIETDGKI
LPASRLLGISRTTLYRKMKEFNISVPKT
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggagaattggctaaggtttgttaatggagaaccggtggttcaagatattaca
cctttaatttatcgctcttgggaacgaagtctgggtcacaatattaatcctactgtcatt
tcacacaataaattccttaacgactctgatctacgggagttgcgggaatcccgggaagac
cttatacgtgctgcaagctctgtcctgccttttctattccaactcctcaacagctgctca
aatttctccatcctgctcggggataaagatgcttttatcctggagtccctgggagagggc
cctttcttaagtaaagcccaacggattttcctttctccgggggggaattggggagaagat
gtaaaagggacaaatgccattggcacagctcttgtcgaagatatgcccgtcaccatacac
ggtgtcgagcattatgtacaagagaaccattttttaacctgctcggctgtacctatacat
gaacttaacggtgaagttatcggcgttatcgatatcagctccgaaatcggaaatcaggat
tgtactctggatatcgcccttacaggggcacgtttaattgaacaaaacctacgcaattta
actattgaacgcgagctaaagttctataaacaaggtactaagctggcccttgacctttta
aaagaaggattcctttctgtcgaccggcacggaatgattacccagatcaattccctgggt
gcttccctcatcggcttgaaaaaggaggatcttttaggcaggcatgttgccgatgtttta
ggtgcaccgaaaggctggctcttaaatcaggatattcttgatttaaggcataaagacagc
aaaggccatgaagtagtgacgcattttcaacgaatttccgacaactcgggaaactcctta
ggggctgtgggtgtaatacaaattcatgagcagaaaatggatggtttgggctgggtgggt
agaacaagtcttaaatcacaagtaattttagaaaaagcacacaaagcagctcaaactaat
ttctctgtcctccttcaaggacagacgggtacgggaaaagagattatagcccgcatgatt
catgaattaagtttgcgcaggaacggacctttcattgctcttaactgcgcagccattccc
agtactcttctggaaagcgaattgtttggctacgcagacggcgcttttacaggcgcccgt
cgcggcggacaaccgggaaaatttgaacttgctcatgaagggaccattttcctggatgag
attggtgatatgccacttaatgcgcaagttgctcttttgcgtctgcttcaggaaaaatca
cttacccgaatcggaggcaaaaccattcagaaaattgatgttcgcgttataaccgcttct
cacaaagatttaaaggctctggttgatgccaatgcctttcgccatgatttattctatcgg
cttaaagtggtgtctatcgatttaccgcctctggtccagcggcttgaagatttgcccgag
ctggtcactcattttatacataaagcctgtgctgccattggtcggcccattatcgaaatc
gatgaccaaatccatccctatttttattcctatagctggcccggaaatgttcgcgaattg
gaaaattgcattgccgggatggttgccatgtgtactgactcgatgctcacagtcgatgat
ttacccaaggaagtaagagaatctttgagtgagaaagatggttcagaacctatatctatg
cttgctcaccaaactcgtcaaatgattcttcaagccctgattgaaactgacggaaaaatt
ctgcctgcttcccggctcttagggattagccgtactaccttataccgaaaaatgaaagag
tttaatattagcgtaccgaaaacttaa
DBGET
integrated database retrieval system
