Desulfitobacterium dehalogenans: Desde_2712
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Entry
Desde_2712 CDS
T02146
Name
(GenBank) HhH-GPD superfamily base excision DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desde_2712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_2712
Enzymes [BR:
ddh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Desde_2712
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desde_2712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
RALGAPB_N
RecR_HhH
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AFM01025
UniProt:
I4AAP0
LinkDB
All DBs
Position
complement(2733734..2734327)
Genome browser
AA seq
197 aa
AA seq
DB search
MIFPYGSKEIEYLKTRDEVLGQAIERMGMIEREVTPNLFKALISSVVSQQISKKAAETVW
NRLQTLLGNISAEEIVLADLKAIQGCGMSTRKAGYIKGIAAAAQRGEVDFHKLHTLSDEE
IIHSLSALPGVGVWTAEMLLIFSLCRPDVVSYRDLAIRRGMMNCYVLEELSKGTFEHYRK
KYSPYGSVASLYLWAMS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgatttttccatacgggtcaaaagaaatcgagtatttaaaaacccgggatgaagtcctg
gggcaagctatagagcgcatggggatgatcgagagagaggttaccccgaacctttttaaa
gctctgatctccagtgtggtcagccagcagatttccaaaaaagcagctgagaccgtatgg
aaccggctgcaaactctcctgggaaatatcagtgccgaggaaatcgttttagccgatctg
aaggctattcaaggctgtggaatgtccacacgcaaggcggggtatatcaaagggattgct
gcggccgcccaaagaggtgaggtggatttccataagcttcataccctgagtgatgaggaa
atcatccactccttgtcagccttacccggtgtgggagtgtggacggcagagatgctgctc
atcttttctctttgccggcccgacgtggtcagttatcgggatttagctatccgcagggga
atgatgaactgttatgtgctggaggagttatctaaggggacctttgagcattaccgtaag
aagtattcaccctacgggtctgtggcttctctgtatctttgggccatgtcttag
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