Desulfitobacterium dehalogenans: Desde_2831
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Entry
Desde_2831 CDS
T02146
Name
(GenBank) (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh00900
Terpenoid backbone biosynthesis
ddh01100
Metabolic pathways
ddh01110
Biosynthesis of secondary metabolites
ddh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Desde_2831
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Desde_2831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ddh03011
]
Desde_2831
Enzymes [BR:
ddh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Desde_2831
Ribosome [BR:
ddh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Desde_2831
Bacteria
Desde_2831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
MRP-S35
DUF7205
Ntox43
CsrA
Motif
Other DBs
NCBI-ProteinID:
AFM01135
UniProt:
I4AB00
LinkDB
All DBs
Position
complement(2845050..2847035)
Genome browser
AA seq
661 aa
AA seq
DB search
MKIIRAEKAGFCFGVKRALDMAERTVQSSSTASLGPLIHNKQVVEKMERQGVRVVGEVKE
TQAGDTLIIRSHGVPPDIYDEAQRCQVKVVDATCPFVQKAQQLAAESSQSSQVVVVGDRQ
HPEVQGILGWAGGSAIAIETLEEAVELPFYEKLSVLAQTTQPAANFHGIVDELKKHTHEL
KVHNTICNATEERQTVARELAGNVEVMIVVGGKNSANTRKLAGICSERTRTYLIETADEL
ENNWFTGVETVGLTAGASTPDWIIEEVYKKMSTMENNETHEMMNMEDWAEEMQNLHRGAL
VTGTVVKINHDEVFVDLGWKSEGVISLKELTVASGLQPSDIVSIGDKISAVVLRVENEEG
NPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDVGMRGFVPASQIQPGYV
EDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLGTLQEGDVVSGVVKR
LAQFGAFVDIGGVDGLLHVSDIAYTRVKHPSEYVNVGDEVEVQILKVDKDQGKISLGLKQ
LKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLEDGIDALIHISQLSEKRVNKVEDIV
KVGDMVQAKVIECKPEEKRISLSIREAAAEAQATEDAELLASQSEAPQVTIGDIIQSESE
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatcatccgggcggaaaaagccggattttgctttggtgttaaacgagccttagat
atggcagagcgaactgttcaatcttcaagcaccgcgtctttaggacccttaattcataac
aagcaggttgtggagaagatggagaggcaaggggttcgtgtggtaggggaagtgaaggag
actcaagcgggtgacaccttgattattcgctcccacggggtgcctccggatatctatgat
gaagcccaacgctgtcaagtcaaggtagtggatgccacttgtccatttgtgcaaaaggct
cagcagctggctgcagaatcctctcaatccagtcaagtggtagtagtgggggatcggcag
caccctgaagtccaaggaatcttaggctgggccggtgggagtgccattgccattgagacc
cttgaggaagccgtggaacttcccttttatgagaagctttccgtacttgctcaaacaacc
caaccggcagctaatttccatggaattgtggatgagttaaaaaaacatacccatgagctc
aaggtacataatacgatttgcaatgccaccgaagagcgacagaccgtagcccgtgaattg
gcgggtaatgttgaggtgatgattgtggtcggaggcaaaaacagcgccaacaccagaaaa
ttggcggggatttgctcagaacgaacccggacctatctcatcgaaacagctgacgaattg
gaaaataactggtttacaggggtcgaaaccgtaggattaacggcgggggcctcgacacca
gattggattattgaggaggtttataagaagatgtcgacaatggaaaataacgaaacccat
gaaatgatgaatatggaggactgggctgaagaaatgcaaaatttgcatcggggagcctta
gtcacaggaaccgtagtgaaaatcaatcacgatgaagtatttgttgacttaggttggaaa
tcggaaggagttatctccttgaaggaactcaccgtagcttctggccttcaacccagcgat
atcgtatccatcggcgataaaatcagtgctgtcgtcctgcgtgtggagaatgaagaagga
aaccctgttctctctaaacgccgggctgatgaaatggctgctgtggacaagctgaaagaa
ttggcggagagtaaagaagagattcaaggaaaagtggctgatgtggtcaaaggtggtctt
attgttgacgtaggtatgcgaggctttgtccctgcctcccaaattcagccaggttatgta
gaggatttaaatcaatttaaaggccagactctgcgtctccgggtgattgagtttgatccg
gctaagcggcgtgttgtcctttcccagaaagaaattctgcaagaagagcaagctgctaag
aaagagcaccttcttgggacccttcaggaaggggatgtggtcagtggcgtcgtgaagaga
ctggctcagttcggtgcgtttgtggatatcggtggagttgacggattgcttcatgtttcc
gatatagcttatacccgggttaagcatccttctgaatatgttaatgtgggggatgaagta
gaagtccaaatcctcaaagtggataaagatcagggcaaaatttccctgggtctaaaacaa
ttaaaacccagcccatgggaaagcgctcctgaaaaatatgccttaggctctttggttaca
ggaaaagtggtgcgcatagctccctttggagcctttgtccaattggaggatggtattgat
gcgctgattcatatctcccagctttctgaaaaacgggtcaacaaagttgaagatatagtg
aaagtcggtgacatggttcaagcaaaggtcattgaatgcaagccggaagaaaaacggatt
agcttaagtatccgtgaagctgctgctgaagcacaggctacggaagatgcagaactttta
gccagtcagtcagaagcgcctcaggttactatcggtgatataattcaatctgaatcagaa
tcctaa
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