Desulfitobacterium dehalogenans: Desde_2922
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Entry
Desde_2922 CDS
T02146
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh00900
Terpenoid backbone biosynthesis
ddh01100
Metabolic pathways
ddh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Desde_2922
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ddh01006
]
Desde_2922
Enzymes [BR:
ddh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Desde_2922
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Desde_2922
2.5.1.29 geranylgeranyl diphosphate synthase
Desde_2922
Prenyltransferases [BR:
ddh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Desde_2922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AFM01225
UniProt:
I4AB90
LinkDB
All DBs
Position
complement(2931300..2932169)
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AA seq
289 aa
AA seq
DB search
MFQKELDDYARLVDSYLARLPWQAGTLTESMKYSLSAGGKRIRPVLALAAAHAVGGEGED
ILPAVCGLELIHTYSLIHDDLPAMDDDDYRRGSLSNHKVFGEGQAILAGDALLTYAFELL
AQPMGGVEPQRQLRAIREVAQAAGPAGMVGGQVLDLEAEEKQLNLSELEQVHRLKTGAML
VVSARLGAILAGGTEEKIDALTRYAQAIGLAFQIKDDILDLESDSETLGKPVHSDLRQHK
STYPSLMGLEGAKLELKVKTDEAHAALEVLGERAGFLHEFADYIAQRKH
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaggaattagatgattatgctcgattagtggactcctatttggcacgactt
ccttggcaggccggtacccttactgaaagcatgaagtattccctttctgcagggggcaaa
cgcattcgccctgttctggctcttgcggcggctcatgctgtggggggtgaaggtgaagat
atccttccggcagtctgtggtttggagcttatacatacctattccttaatccatgatgat
cttcccgccatggacgatgacgattaccggcgggggagtttatccaatcataaagttttc
ggggaaggacaggccattcttgccggtgatgcccttttaacttatgcctttgaacttctt
gctcaacccatgggcggggtagagccccaacgtcagcttcgggccatcagggaagttgcc
caggcagcaggacctgcgggaatggtaggtggacaggtgctggatttggaagctgaagaa
aagcagctgaacctttccgagctggagcaagtccatcgtctgaaaaccggggcgatgctg
gtagtttccgctcgtttaggagctattcttgccggaggaacggaagagaagatcgacgct
ttgacccggtacgcccaagccatcggtctcgctttccagattaaggacgatatcctcgat
cttgaaagtgatagcgaaaccctgggtaagcccgttcatagcgatctccgacagcataaa
tccacctacccctctttaatgggactggaaggcgctaagctggaattgaaggtaaagacc
gatgaagctcatgccgccttggaggttttaggagagcgggccggctttctgcacgaattt
gctgattatattgctcagcggaagcattga
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