Desulfitobacterium dehalogenans: Desde_3040
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Entry
Desde_3040 CDS
T02146
Name
(GenBank) SpoIID/LytB domain protein
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
ddh
Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Desde_3040
Enzymes [BR:
ddh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Desde_3040
Peptidoglycan biosynthesis and degradation proteins [BR:
ddh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Desde_3040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
AFM01338
UniProt:
I4ABK3
LinkDB
All DBs
Position
complement(3037288..3038667)
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AA seq
459 aa
AA seq
DB search
MLPFSDRLSFPVKKVFFLLMVAFVLQAAPCQAKEIDVELVWKFKEAGWIKVQVEQGNYIL
KEVDKDKQIETPFPAGSALELTWGGWSPALKKNYDPFQIWRGKELELNRKGEYGSFLVQT
PDGQQVSYRGSLRIRWEDGGCKLINRVEQEDYLKGVVPIEMSNSWAGDGLEALKAQAVAA
RTYMVRKTRATSQITDSPDYDQAYLGRNVEGTANQAVEATRGEIMVDSITYQPIDALYSS
HNGGYTERAENVWSNPDPHFTSQPDPFSQGIGGPADRWRFIIGADVLGQAFEMGPIAKIE
LDKLPSGRVKKVSIRDIDGKVHEVGGRAFVQKFYPYGQPITVQAFLGNLFNVQQIPGDEP
LFSFDLKELGVPSRLSGLVDKQKAQEVGSGPRLGRILSTAQGIREFPASYDVFVFNGRGW
GHGVGMSQWGAYHMAQRGYTYGEILKFYYQQMDLIKYYL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgctgcctttctcggacagattgtcttttcccgtcaagaaggtattctttttgcttatg
gtcgcttttgttctgcaggctgccccttgtcaggcgaaagaaatcgacgtggagttagta
tggaaatttaaagaggccggatggattaaagttcaggtggagcaaggaaattatattctt
aaagaagtggataaggataagcagattgagaccccttttccagcgggctctgctcttgag
cttacctggggaggctggtctcccgctctgaaaaagaactatgatccgtttcagatttgg
aggggaaaagagctggagctgaatcggaaaggggagtatgggtctttccttgttcaaact
ccggatggccaacaggtaagctatcgggggagcctgaggatacgttgggaggatggcggt
tgtaagcttatcaatcgagtggagcaggaggactatctcaaaggagtggtacccatcgag
atgagcaattcttgggcgggcgacggtttagaggcgcttaaagcacaagctgtagccgct
agaacctatatggtaagaaaaacccgcgctacatctcagattacggattctcctgattat
gatcaggcttatttaggaaggaatgtcgaaggtacggccaaccaagccgtagaggctacg
cggggagaaatcatggtggattccataacctaccagcctattgatgccctttattcttct
cataatggcggttatacagaacgggcggaaaatgtctggtctaatccggatcctcatttt
acctcccagccggatcctttctcccaaggaatcggaggcccggccgaccgctggcggttt
attattggggcggatgttctggggcaggccttcgaaatgggtcccattgccaaaattgaa
cttgacaaactcccttcaggtagggtaaaaaaggtaagtatacgggacattgatggtaag
gttcatgaggttggcggcagggcttttgtgcagaaattttatccctatggccagcccatc
accgtccaagcctttctgggcaacttatttaatgtgcagcagatacctggtgatgaaccc
ctcttttctttcgatctgaaggaattgggtgttccctcccgcctaagcgggctggtcgat
aagcaaaaagcccaggaggttggctccggaccccgtttaggccgtattttaagcactgct
caggggattcgggagtttcccgcttcctatgatgtttttgtttttaatggccgtggctgg
gggcatggggtgggtatgtcccaatggggagcctatcatatggctcaacgaggatatacc
tatggggaaattctgaaattttattaccagcagatggatttaatcaagtactatttatag
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