Desulfitobacterium dehalogenans: Desde_3041
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Entry
Desde_3041 CDS
T02146
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desde_3041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_3041
Enzymes [BR:
ddh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desde_3041
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desde_3041
RecFOR pathway proteins
Desde_3041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
nSTAND3
NB-ARC
AAA_14
AAA_3
DUF815
RNA_helicase
TIP49
AAA_24
MCM
TsaE
NTPase_1
ABC_tran
Bac_DnaA
NACHT
Sigma54_activ_2
AAA_28
IstB_IS21
Resolvase
AAA_18
AAA_17
AAA_19
AAA_25
NPHP3_N
RsgA_GTPase
KAP_NTPase
Rad17
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AFM01339
UniProt:
I4ABK4
LinkDB
All DBs
Position
complement(3038738..3039784)
Genome browser
AA seq
348 aa
AA seq
DB search
MEERMITPQQLPGDQEGEVLRPHRLADYIGQTKVKDNLQIFIQAALARGEALDHVLLYGP
PGLGKTTLANIIATEMEVNIRTTSGPAIERPGDLAAILTSLEPRDVLFIDEIHRLSRTTE
EILYSAMEDGCLDIVIGKGPSARSIRLTLPPFTLVGATTRAGQLASPLRDRFGVISRLEF
YEVEDLIKIITRAAGILNLQITLEGAAEIARRSRGTPRVANRLLKRVRDYAQVWEDGMVT
EGLAGKSLDRLEVDPAGLDRIDQKCLLTIIQMFAGGPVGLETLSATIGEEAETIEDVVEP
YLLQQGFIQRTPRGRVATVRAYQHLNIPLNPSSKEGGQEDSLFDSADE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacggatgataactccccagcagcttccaggggatcaagagggagaagtcctc
agaccccatcggctggcggactatataggtcagactaaggttaaggataatctgcagatt
tttattcaagctgccctggccaggggagaagctctggaccacgtccttctctacgggccg
ccgggtctgggcaaaaccacgctggccaatattatcgctacggagatggaggtaaacatt
cgaaccacttcgggaccggctattgagagaccgggagatttagcggctatacttacctcc
ttggaacccagggatgtattgttcatcgacgaaattcatcgtttaagccgtaccactgaa
gaaatactctattccgccatggaggacgggtgcctggatattgtcatcggcaaaggcccc
agtgcccggtccatccgtctcaccttaccgccctttaccttagtgggagcaaccacacgg
gctggacaattagcttcacctttaagggatcggttcggagtcatcagccgccttgagttt
tacgaagttgaagacctgatcaagatcattacccgggccgcaggaatcttaaatcttcag
attaccctggagggagcggcggagattgccaggagatcccggggaaccccgcgggtagcc
aaccgtctcttgaaacgggttcgggattatgcccaggtctgggaagacggtatggttact
gaaggattggccggcaaatccctggaccggcttgaagttgatcctgcgggactggatcgc
attgaccagaaatgcctccttaccatcattcagatgttcgcaggaggtcctgtgggtttg
gaaaccctctcggcaaccatcggggaagaggctgagactatagaagatgtggtggaacct
tatctactccaacaagggtttattcaaaggacaccccggggacgagtagccactgttcgt
gcctatcaacatctcaatattcctctaaatccttcatctaaagaaggtgggcaggaggac
agtttatttgatagtgcagacgaataa
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integrated database retrieval system
