Desulfitobacterium dehalogenans: Desde_3122
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Entry
Desde_3122 CDS
T02146
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desde_3122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_3122
Enzymes [BR:
ddh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Desde_3122
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Desde_3122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFM01414
UniProt:
I4ABS9
LinkDB
All DBs
Position
complement(3124888..3125718)
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AA seq
276 aa
AA seq
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MPLLFGTAGVPLSAKERSTEAGVKRVRELQLDAMEVEFVQGVRMREEKAQKIAKIAVEEK
VALSCHGPYWINFNSQEPEKVAASRDRLLHSARISKILGVRSVIFHPAFYHQDDPQVVLE
RTAGELMIVREILDTEDNDVILRPETTGKPSQLGTLQEVLTLAQVVPGVLPCIDISHLHA
RSNRGINTYDEFCQVLEAAAETLGDRWVKNAHFHVSGIEYGAKGEKKHLILDQSDLRYPE
LLKAFHTFGMEGLVICESPNLEEDALLLQATYHEMG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
ttgccacttttattcgggactgctggggttcccttatcagccaaggaacggtccacagaa
gcaggggtcaaacgggttagggagcttcaactggatgccatggaagtagagtttgtccaa
ggggtccgcatgagggaagagaaggcccaaaagattgccaaaatagctgtggaagagaag
gttgccctaagctgtcatggcccttattggattaattttaattctcaggaacctgaaaaa
gtagcagccagccgggaccgtcttttgcatagtgcacgaataagcaaaatcttaggtgta
agaagtgtgatatttcatcccgctttttatcatcaagatgatcctcaagtggtcttggaa
aggacagctggggaacttatgattgttcgagagattctggacacagaagataatgatgtc
atactgcgaccggagacaacgggaaagccctcgcagctgggcacgcttcaggaggttttg
accttagcacaagtagtgcctggggttttaccctgtattgatataagtcaccttcatgcc
cgcagcaatagggggatcaatacctatgatgaattttgtcaagtcctggaggctgcggca
gaaaccttaggggaccgctgggttaaaaatgctcattttcatgtttccgggattgaatat
ggtgccaagggagagaaaaagcaccttatccttgatcaatccgatttgcgctatcccgag
ctattaaaggcatttcatacctttggtatggaaggattggtgatttgtgaaagccccaat
ctcgaagaggatgctcttctattgcaagctacttatcacgagatgggatga
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