Desulfitobacterium dehalogenans: Desde_3313
Help
Entry
Desde_3313 CDS
T02146
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Desde_3313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_3313
Enzymes [BR:
ddh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desde_3313
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Desde_3313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
Cas3-like_C_2
AAA_16
AAA_30
PIF1
nSTAND_NTPase5
Zn_ribbon_ISL3
AAA_33
DUF3945
AAA_22
TrwB_AAD_bind
nSTAND3
nSTAND6
AAA_19
TsaE
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AFM01601
UniProt:
I4ACB6
LinkDB
All DBs
Position
complement(3305711..3308038)
Genome browser
AA seq
775 aa
AA seq
DB search
MHYAEVLVDVANRRLDQVFHYQIPEGISLKRGMRVLVPLQYRQVQGVVVRLTEQLPQDMV
NPTLKPILGIVDTTNVVPEDLMDLALWLAETTICSIAQSLHTVWPLLKGKVEEYVLPLAS
QEDEDVKTLKILDSETYQALAVLFRSRNKALPLSTYLKRSGLSKTQVEQLAKQGWIKLES
RFTSGVPRSVQTALTSKERVFNGVEDIESMNGTPHEAYVKFDAHKASDCRWELTPEQAKV
CEKVTRALEKQRYETLLLHGVTGSGKTEVYQRLIGEVLAKGGSAILLVPEISLTSQIARY
FQEQFGEQLIVLHSGLQVGEKAKAWQDILQGKIRVVIGARSAVFAPLPNLRLIILDEEHE
GAYRQEENPKYHARNVARKRMEQLQGVVLLGSATPSLEAYAAAQTGKVPLLVMENRVNQR
PLPPVEVVDMREELIKGNRSMFSFALQDKLKRTLERGEQCMLFLNRRGYSTFVVCRECGY
VIRCHDCDIALTYHSQGNIMRCHYCNHEEIPPRTCPECGSRYIRFFGQGTQRVEDEIKGL
YPAARILRLDFDTTRSKDAYEDILGKFRRQEADILVGTQMMAKGLDFPNVTLVGVVAADQ
MLNMPDFRARERTFQLLTQVAGRAGRSQKPGQVVIQTYAPEDRAIIQASQHNFKGFFWEE
IGYRKARNYPPFTHVIRVTLIHEKEERVVKGAHSLASCLKLGMVSDENGNTSLDILGPAP
AVMPRLKNHFRWQVSVKGKSMDTLREFLHEGVQRFARDSISSGIQLNIEVDPLSM
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
gtgcattatgcagaagtacttgtggatgtggccaatcgtcgcctcgatcaagtgtttcac
tatcagattcctgaggggatatctctcaaaagagggatgagggtccttgtgcctttgcaa
tatcgtcaagtccaaggagtagtggtccgactaacggagcagttaccccaggatatggtc
aacccaaccctaaaacctattttggggattgttgacacgacgaatgtagtgcctgaagac
cttatggatttggctctgtggctggcggagacgacgatctgctccatcgcccaaagcctt
cataccgtttggccccttcttaagggtaaggtggaagagtatgtccttccccttgcctcg
caagaggatgaagatgttaagactttaaaaattctggattctgagacctatcaagcttta
gcggttctctttcggtcgcggaataaggccttgcccttaagtacttatcttaagcgttcc
ggattatccaagactcaagtagaacaactggccaagcaaggctggatcaaactggagtcc
cgctttacatcgggtgttccccgaagcgttcagactgctcttacttccaaagagagggtt
tttaatggggtagaggatatagaatcaatgaacggtactcctcatgaggcctatgtcaaa
tttgatgctcacaaagcgtcggattgccgctgggaactcactccggaacaagcgaaagtg
tgtgaaaaagttacccgggcactagaaaaacagcgatatgaaacccttcttttgcatggg
gtaaccggcagcggaaagacagaggtctatcagaggctgattggggaagtattggcaaaa
ggtggttcagccattttactggttcctgagatttctttaacttctcagatcgcccgctat
ttccaagagcaattcggagagcagttaattgtactccactcaggattacaagtcggggaa
aaggccaaggcctggcaggatattctccagggtaaaatcagggttgttattggggcccgt
tcagcggtttttgctcctttgcctaatttgcgcctgatcatattggatgaagagcatgag
ggcgcttaccgccaagaggaaaatcccaaataccatgcgcgcaatgtggcccgtaaacgg
atggaacaacttcagggagtggtactcttgggaagcgctaccccttccctggaagcctat
gccgcagctcagaccggtaaagttcctttgcttgtgatggaaaatcgggtcaaccaacgt
ccccttcctcctgtagaagtagtggatatgcgggaggaattgattaaagggaatcgcagt
atgttttccttcgcccttcaggacaaattaaaaaggactttggagcggggagaacagtgc
atgttgttcttaaaccgccgcggttactctacctttgtggtgtgtcgggaatgtggttat
gtgattcgctgtcatgactgtgatatagctctgacttaccacagtcaaggcaatattatg
cgttgtcattattgcaatcatgaagagattcctccccgtacttgccccgaatgcggcagt
cgctatattcgtttttttgggcaagggactcagcgggtggaagatgagattaaagggctt
taccctgcagcacgaatcctccgtttggattttgataccacccgatccaaagatgcctat
gaggacatcctgggaaaattccgccggcaggaggcggatattcttgtgggtacgcaaatg
atggccaaggggcttgattttcctaatgtcactttagtgggagttgtggcagctgatcaa
atgctgaatatgccggattttcgggccagggagagaaccttccagctcctaacccaagtg
gccggtcgggccggccgcagtcaaaagcccgggcaggttgtaattcagacctacgccccc
gaagatagggcgattattcaagcctcgcagcataattttaagggattcttttgggaagag
atcggctatcggaaggcgagaaattaccctccctttactcatgtcattcgggtgaccctt
attcatgaaaaggaagaaagagtggtaaaaggagctcatagcttagcaagctgtttaaaa
ctaggaatggtatccgacgaaaatgggaatacttccctagatattctcggccctgctccg
gctgtgatgcctcgccttaaaaatcactttcgctggcaggtctcggtcaaaggaaaatcg
atggatacattacgtgaattcttgcatgaaggtgtccaacgttttgcacgagattccatc
agttcgggaattcaactgaatatcgaagtggatccattaagtatgtaa
DBGET
integrated database retrieval system
