Desulfitobacterium dehalogenans: Desde_3365
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Entry
Desde_3365 CDS
T02146
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh03420
Nucleotide excision repair
ddh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desde_3365
03430 Mismatch repair
Desde_3365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddh03400
]
Desde_3365
Enzymes [BR:
ddh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desde_3365
DNA repair and recombination proteins [BR:
ddh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desde_3365
MMR (mismatch excision repair)
Other MMR factors
Desde_3365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_19
DEAD
SLFN-g3_helicase
ResIII
AAA_30
NACHT
nSTAND3
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFM01652
UniProt:
I4ACG7
LinkDB
All DBs
Position
complement(3358879..3360927)
Genome browser
AA seq
682 aa
AA seq
DB search
MFNQKESDEREYLGEVQRKLKTALEHMKETIDHYSREILETKRYIYENQLDLAEKAANRI
AVHDSVTFGEKAIKERGKLQKLIQSPYFGRIDFAETKEGKGDPFYIGVHAFADPATSHNI
IFDWRAPISSMFYDFEIGPAFYVAPVGKIDGVLTLKRQYRIRQTQMEYMIESSLNIGDEI
LQKELSQNSDDKMKNIVATIQREQNAIIRNDSAKVLILQGAAGSGKTSIALHRVAFLLYR
YKETLTSKDLLIISPNKVFGNYISNVLPELGEENMAEISFDDIATSMLGKYHYQSFSEQV
ESLLADEDAEAIARIEFKATNLFVEQLQSYLEYADENYFVPTDLALGSFFVSKETLLSNY
HALKRLPMKKRLRKIADDLIEKYKRHTNKKMDAAISRQIRDSIQKMFQFTDTLLLYQNFY
RYLGRDDLFRFIRKNTLEFCDVYPFIYVKMYFEGEEQDYKSIQHLLVDEMQDYTPIQYAV
LAKLFSCKMTILGDSYQSVNPYSSSSAEKIQPYFAGCDCMELCRSYRSTIEITGFTQKIL
ENKKLIPIERHGDKPTITVCQTQKEQLGKIRHLIEQFRQSAQASLGIICKSQKQARLLFE
QLHTAYDTMILLSFGSSEFQDGIVITSVHMSKGLEFDQVIVPDVSDDLYKTQLDRSLLYI
ACTRAMHKLDLTCCGKKTKFLN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcaaaaggaaagtgatgaaagagagtatttaggtgaagtacagagaaagctc
aaaacagcgctggaacacatgaaagaaacaatagaccattactccagagaaatattagag
actaagcggtatatctatgaaaatcaacttgaccttgctgaaaaagcggcgaatagaatc
gctgttcatgatagcgttaccttcggagaaaaagctatcaaagaaagagggaagcttcaa
aaattaatacaatctccctattttggaagaattgattttgctgagacaaaagaaggtaaa
ggagatccattctatattggagtgcatgcttttgctgatcccgcgacatctcacaacatc
attttcgactggcgagcacctatctcaagtatgttttatgattttgagattggcccggct
ttttatgtggctcctgttggaaaaattgatggagtgctgaccctaaagcggcaatacaga
atcagacaaactcaaatggagtatatgattgaaagctctctgaatattggcgacgaaatt
ttgcaaaaggaattaagccagaattccgatgacaaaatgaaaaacattgtagcaaccatc
caaagggagcaaaacgctatcattagaaatgacagtgcaaaagtcctgatcctacagggg
gcagcaggttccggaaagacctctatagcattgcatcgggtcgcgtttttactgtatcgc
tacaaagagactttaacatcaaaggatctcctgattatttctcctaataaagtattcggc
aactacatctccaatgttttgccggaattaggagaagagaatatggcagaaataagtttt
gatgatattgccacgagcatgcttggaaagtatcactatcagagtttttctgaacaagta
gaaagcttattagcggatgaggatgccgaagcaattgccagaattgagtttaaggcgaca
aacctctttgtagagcagctccaatcgtatttggaatatgctgacgaaaactattttgtt
cccaccgatctggccctcggaagtttttttgtttccaaagaaaccctgctttctaactat
catgctctgaaaaggctgcctatgaagaagcggttgcgtaaaatagcagacgatttaata
gaaaaatacaagagacatacgaataaaaagatggacgccgcaatttcccgccaaataaga
gacagcatacaaaaaatgtttcaatttaccgatacgcttttgctgtatcaaaatttttac
cgctacctcggtcgggatgatttgttccgttttatccgtaaaaatacgttggagttttgc
gatgtctatcccttcatttatgtgaaaatgtattttgaaggagaagaacaggattacaaa
agtatacagcacttgttggttgatgaaatgcaggattatacgcctatccaatatgccgtt
ttagcgaaactattttcctgtaaaatgaccattttgggcgacagctatcaaagcgtaaat
ccttacagttcatcctccgcggaaaagattcagccgtactttgccggatgtgattgtatg
gaattgtgcaggagctaccgttcaaccattgaaattaccggatttacccaaaaaatttta
gaaaacaaaaaactaattcccattgaacggcatggtgacaaaccaacaataacagtatgt
caaactcagaaggaacagttgggcaagatacggcatttgattgagcaattcagacaatcc
gcacaggcctccttgggtattatctgcaaatcacagaaacaggcaaggctgctttttgaa
caacttcataccgcttatgacactatgattctattgagttttggcagcagcgaatttcaa
gatggcatcgtcatcacttctgtacacatgtcgaaaggacttgaatttgatcaggtgatc
gtgcccgatgtttccgatgatctttataaaacacaattagaccggagtctattatatatt
gcctgcacaagagccatgcacaaattagatttaacttgttgtggcaaaaaaacgaagttt
ttgaactaa
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