Desulfitobacterium dehalogenans: Desde_3713
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Entry
Desde_3713 CDS
T02146
Name
(GenBank) RNAse G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ddh
Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddh03019
]
Desde_3713
03009 Ribosome biogenesis [BR:
ddh03009
]
Desde_3713
Messenger RNA biogenesis [BR:
ddh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Desde_3713
Ribosome biogenesis [BR:
ddh03009
]
Prokaryotic type
rRNA processing factors
Desde_3713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
FixG_C
HdrB-like_C
Motif
Other DBs
NCBI-ProteinID:
AFM01986
UniProt:
I4ADF1
LinkDB
All DBs
Position
complement(3730130..3731365)
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AA seq
411 aa
AA seq
DB search
MKEIVLQGQAQRMRAAVLEDRELVEVHEEEGSVSRLVGNIYRGRVINVLPGMQAAFVDIG
LEKNAFLYVGDAVPFQYEEDEKLPLPHELRVEQVLKPRQEMLVQITKEPVGSKGARITTN
LTIPGRYAVLMPNTEYVGVSRKITEEEERERLREIAREACPEGKGIIVRTLAKGIEGKEL
ADDFSELVALWERLEKKIPHVAIPGLVHQDVDLVSRAIRDWVDQEVKIITVNQPDVAVGM
HNALLELGHPAANHVQLVYKEDIFSDYGIDDKIRQALRPKVWLKSGGYLVIQQTEALTVI
DVNTGKYVGDKSLQDTILHINQEAALEIARQLRLRNLGGIIVIDFIDMTSEEDKEQLLNV
LEKAVARDKLKCQVMGLTQLGLVEMTRKKVGQTLEVRYGHPCSHCDGSGRI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagattgttctgcagggccaggcccaaaggatgcgggcggcggtgctagaggat
agagaactggttgaggttcatgaagaggaaggttcggtttcccgattggtcggaaatatc
taccggggacgggtcattaatgtattgccaggcatgcaggcggcatttgtcgatataggt
ttggagaagaatgcctttctctatgtgggagatgctgtcccgtttcagtatgaggaggat
gagaaacttcccctacctcatgagttgcgggtggaacaggtgcttaagccccgccaagag
atgttggttcaaattactaaagaaccggtaggctccaaaggggcaagaatcacgacaaat
ctcaccatccccggccgctatgccgtcctgatgcctaacactgaatacgtgggtgtctcg
cggaagattacggaagaagaagagagagaacgtctacgggagattgcccgtgaagcttgt
ccggaggggaaaggaatcatcgttcggactttggccaaaggaatcgaaggtaaggagctg
gccgatgatttcagcgagcttgtggccttatgggagcgcctagagaagaaaattccccac
gtcgctataccaggtttggttcatcaggatgtggatttggtttcccgggcgattcgcgat
tgggtggatcaagaggtaaaaatcattacggtcaatcaacccgacgttgcagttgggatg
cacaacgctttactagaattgggccatccagctgcgaaccatgtgcaattggtttataaa
gaggatatcttctctgattacggcattgatgataaaatccgccaggctcttcgccctaag
gtatggctgaaaagcggcgggtatttagttattcagcaaacggaagccttgacggttatc
gatgtgaataccggcaaatatgtcggggataaatcacttcaagatacgatcttgcacatc
aatcaggaggcagcccttgagattgccagacaactgcgtttgcgcaatttgggtgggatt
attgttatcgattttatcgatatgacttctgaggaagataaagaacagcttttgaatgtg
ctcgaaaaggcagtagcacgggataaattaaaatgccaggttatgggtctgactcaattg
ggattggtggaaatgacacgcaagaaagttggacaaacccttgaggtaaggtatggacat
ccctgctctcattgtgatggttctgggaggatatag
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