Desulfitobacterium dehalogenans: Desde_3968
Help
Entry
Desde_3968 CDS
T02146
Name
(GenBank) TRAP transporter, DctM subunit
KO
K21393
TRAP-type transport system permease protein
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desde_3968
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ddh02000
]
Desde_3968
Transporters [BR:
ddh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Desde_3968
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
Motif
Other DBs
NCBI-ProteinID:
AFM02233
UniProt:
I4AE48
LinkDB
All DBs
Position
complement(4025060..4026934)
Genome browser
AA seq
624 aa
AA seq
DB search
MIKEEAQQSKTFSGFLKVLDQRFEEVAIVAGFLFFTMLITLQVINRYVLTFADIANIGVW
SEELARYTFIWVSYIGAALVIKKRANINVDAVIRNLPASLNQVLNLVSSLLTFVLFYILI
KGGIATITMQVTNHQVTPAMGIPMYIPYLAVPLGISLMFFRTLQNVIEDIKRMSFKSILL
SIAITIILFLPIFLIENINATLLLFVYFILLIIMGVPIAFSLGIATLVTTINTQAIPLDY
FSQAAFNGIDSFPIMAIPFFVAAGVIMGSGGLLRRLLNLGNELVGFFPGGLALVTVITCM
FFAAISGSGPATVAAVGTMMIPEMKRQGYSVAFSAAIVAAAGSIGVIIPPSNPFVIYGVV
GQQSVGKLFIAGIIPGILIGIVLMILAYRTSKKNGWKGNKDRIDIKAVFRAAWDAKLALV
VPVIILGGIYGGYMTPTEAAAVSVTYGLIIGLCVYRDLKFKDIYNCLVESGSTTAVIIIL
MAMATIFGRFITIERVAEAVAAIVLGISTNKFVVLLLINIFLLFVGMVMEALAAIIILTP
ILLPMVLQLGVDPIQFGVIMVVNLAIGFITPPVGVNLFVASGISKVRIEEIVRPAIPLIL
GMIVILLLVTYIPEISLWLPSLMN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagaagaagctcaacaaagtaaaaccttttcgggatttttaaaagtacttgat
caaagatttgaagaagttgccatagtcgccggttttttattctttacaatgttgattacc
ttacaggttattaatcgttacgtattgacatttgccgatattgccaatattggtgtatgg
tcggaagagttagcaaggtatacttttatttgggtctcctatattggagctgctctggtt
attaaaaaaagagccaatattaacgtggatgctgttattaggaatttacctgcttctctg
aatcaagttttgaatttagttagttcattattaacttttgttttattttatattctgatt
aaaggcggaatagccactataactatgcaagttacaaatcatcaggttactccggcaatg
ggaattcctatgtacataccctatttggccgttcccttaggaattagcctaatgtttttt
agaaccctgcaaaacgttattgaagatatcaaacgaatgagttttaaatcgattttactc
agtatagctattactattatactgtttttacctatttttttgattgagaatatcaatgct
actcttttgttattcgtttactttatattactgataataatgggcgtacctattgcattt
agtttgggaattgccactttagtcacaacaataaacactcaagctatacctttagattat
ttttcccaggcagcgtttaacggtattgacagttttcctattatggccataccgtttttt
gtagctgcgggagttatcatgggaagcggaggcttgttaagaaggctgctaaatctaggg
aatgaattagtaggtttcttcccgggaggattagctttagtaacggttattacctgtatg
ttctttgccgcaataagtggctccgggccggcgacggttgctgcagtaggaactatgatg
atacctgaaatgaaaaggcagggatatagtgttgcttttagtgccgcaatagtagctgca
gccggatcgattggtgttattattccgccaagtaatccctttgttatttacggcgttgtc
ggccaacaatcggttggaaaactgtttattgcgggtattattcctggaattctcatcggt
atcgttttaatgatcttggcttataggacctcaaagaaaaatggttggaaaggcaataaa
gatcggatcgatatcaaggcagtatttcgagccgcctgggatgccaaattagccttagtc
gtacctgttattattttgggcggcatttatggaggatatatgactcctacggaagctgca
gctgtttctgtaacttacggtttgatcattgggctgtgtgtttaccgtgatttaaaattc
aaggatatatacaattgtcttgttgaatcaggttctaccaccgcagtgatcatcattctt
atggctatggctacaatctttggacgatttatcactatagagagagtcgccgaggccgtt
gcagctatagttctgggcatcagtacgaataaatttgtcgtattgttattgattaacata
ttccttctctttgtaggaatggttatggaggcacttgcggcgatcatcattttaaccccg
attttattgcccatggtcctgcagctcggtgtagatcctatacaatttggagtgatcatg
gttgtcaatttagcgattggtttcataacaccgccggttggagttaacctgttcgttgct
tccggaatatcaaaagtaaggatagaagaaattgttcgcccagctattcctcttatcttg
ggcatgatagttatccttttactggttacctatataccagagatttctttatggcttccc
tcattaatgaattaa
DBGET
integrated database retrieval system
