Desulfitobacterium dehalogenans: Desde_4090
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Entry
Desde_4090 CDS
T02146
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ddh
Desulfitobacterium dehalogenans
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddh03032
]
Desde_4090
Enzymes [BR:
ddh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Desde_4090
DNA replication proteins [BR:
ddh03032
]
Prokaryotic type
DNA Topoisomerases
Desde_4090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Octopine_DH
WH_Rok
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFM02351
UniProt:
I4AEG6
LinkDB
All DBs
Position
complement(4173347..4175536)
Genome browser
AA seq
729 aa
AA seq
DB search
MGKSLVLTEKPSVGRDIAKLLGCNQKGNGCFIGAKYIVTWALGHLVTLADPEAYGDQYKT
WRLEDLPMLPKEMELVVIKETSKQYAAVKQLLRQPDVDELIIATDAGREGELVARWIIRK
AGWKKPIKRLWISSQTDKAIREGFSNLKPGKAYESLYAAAECRAQADWYVGLNVTRALTC
KYNAQLSAGRVQTPTLALVVEREKEIQNFVPKGYWTINARVKGFSLSWQDKSNGQSRIFD
QKKAEQLVQKLRGHKGLVAEIKKEAKKEQPPQAYDLTELQRDANRKYGFSAKQTSSIMQQ
LYEHHKLVTYPRTDSRYLSEDIVPTLPERLKTIAVGPYAESARRVLRKPITPTKRWVDNS
KVTDHHAIIPTEQTVFLNKLSPEEVKIYDLIVRRFIAVLSPAFEYEQTTVKVEIQGEYFI
AKGKIVKQKGWRSVYEGRDAADEEADHEEQEQNLPDLQPKQSIEVLDLKLLPGKTKPPKR
YTEATLLSAMEHPGQRVDDEALRETLEKTSGLGTPATRADIIEKLFSSFYMERNGKEIIP
TSKGIQLIGLVPSELKSPELTAKWEQQLSEISKGREDRQHFIQGIRSYATQLVSEVAGSG
RTYRHDNMTRAKCPECGKFLLQVKGKRGEMLVCQDRECGYRQGLSVQSNARCPRCHKKMK
LQGEGEQKIFTCACGYREKLSAFTKRKEQEGSKGSYNKREVNHYLQKQQKDAPLNTALAD
ALAKLNLPK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagtttagtcttaacagaaaaaccctccgtgggtcgtgatattgccaaatta
ttaggctgcaatcaaaagggcaatggctgcttcataggtgccaaatatattgtaacctgg
gcactgggtcacttagtaaccctcgccgatccggaggcttatggggatcagtataagacc
tggcgcctggaagacctacccatgctccctaaggaaatggaattggtcgttatcaaagaa
acctccaagcaatatgctgccgtcaagcaactccttcgccagcctgatgtggacgagctg
attattgccacagatgcaggccgggagggggagttggtggcccgttggattatccggaag
gccggttggaaaaagcccatcaaacggctctggatttcttcccaaacggataaggctatc
cgagagggctttagtaatctcaagccaggtaaggcttacgagtctctttacgcagccgcc
gagtgccgtgctcaagcggactggtatgtgggcttgaatgtcacgcgagccctgacctgc
aaatacaatgcccaactctcggcaggaagagtgcaaacccccaccctggctctggtggtg
gaacgggaaaaggagattcaaaactttgtccctaagggttattggactattaatgcccgt
gtgaaaggcttttctttgagctggcaggataagagcaatggacaaagcagaatttttgat
cagaaaaaagcagaacagcttgtgcagaaattaaggggtcataagggcctggttgcagag
attaagaaagaagctaaaaaagagcagcctcctcaggcctatgatttaaccgaactccaa
agggatgccaacagaaaatacggattctcggccaagcaaacttcatccatcatgcagcag
ctttatgaacatcataagctggttacttacccaagaacagattcccgttatctttccgag
gatatcgtcccgacacttccggaacggctcaaaaccattgccgtggggccttacgctgaa
tcggcccgccgggttctgcgcaagccgattacccccacgaaacgatgggtggataactcg
aaagtcacggaccatcacgccattataccgacggaacaaacggtgtttcttaataaactc
agtccggaagaggtcaaaatctatgacctaattgtgcggcgctttatcgcggtcctgtcc
ccggcctttgaatacgagcagaccacggttaaagtggagattcagggagaatacttcatc
gctaaaggcaaaattgttaaacaaaaaggctggcgaagtgtatacgaaggcagggatgct
gctgacgaggaggccgaccatgaggaacaggaacaaaatttgccggatctccagcccaag
caaagtattgaagtccttgacctaaaacttttgccgggcaaaaccaagcctccgaagcgt
tacaccgaagcgaccctgctttcggctatggaacatcccgggcagcgggtggatgatgag
gccctgcgggagactctggaaaaaaccagcggtttgggtactccggccacccgggccgat
atcattgaaaagctctttagttctttctatatggagcgcaacggcaaggaaatcattcct
acttccaaagggattcaactgattggcttggttccctctgaactgaaatccccggagctc
acggcaaagtgggaacaacaactcagtgaaatcagcaaagggcgggaagaccggcaacac
ttcatccaggggatcagaagctatgccacccaacttgtctcggaagtggccgggagcggc
cggacttatcgccatgacaatatgacaagggccaaatgtcctgagtgcggcaaattcctc
ttgcaggtgaagggcaaacgtggggaaatgctggtttgccaggatcgggagtgcggttat
cgccaggggctttccgtacaatccaatgcccggtgtccccgatgtcataaaaaaatgaaa
ttgcagggagaaggagagcaaaagatcttcacctgtgcctgtggttatcgggagaaactg
tctgcctttaccaagcgtaaagagcaagaaggaagcaaaggatcctacaataaaagggaa
gtcaatcactatttgcaaaaacagcaaaaggatgctcccttaaatacagcgttagctgat
gcccttgctaaactaaatctaccgaagtaa
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