Desulfitobacterium dehalogenans: Desde_4169
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Entry
Desde_4169 CDS
T02146
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ddh
Desulfitobacterium dehalogenans
Pathway
ddh00300
Lysine biosynthesis
ddh00470
D-Amino acid metabolism
ddh01100
Metabolic pathways
ddh01110
Biosynthesis of secondary metabolites
ddh01120
Microbial metabolism in diverse environments
ddh01230
Biosynthesis of amino acids
Module
ddh_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
ddh_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ddh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Desde_4169
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Desde_4169
Enzymes [BR:
ddh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Desde_4169
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFM02430
UniProt:
I4AEP5
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All DBs
Position
complement(4243504..4244754)
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AA seq
416 aa
AA seq
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MAAKKLPFNQEQLRKIIADYGTPFHIYDEVAIRKNAQRLQSAFAWAPEFKEYFAVKALPN
PHILKILREEGFGADCSSLAELILAEKAGITEENIILTSNNTPADEFQKAKDLWAIINLD
DITHIDYLEKHAGLPEVISFRYNPGFLREGNAIIGSPEESKYGLTKEQLFQAYEIVRDKG
VKRFGLHTMIISNELNPDFFIETAEMMFDLAIELKERLGIRLEFVNFGGGIGIPYRPEQE
PVNLETIGEGVRKVYEEKIVPNGLDPLRICLECGRMVTGPFGYLVTQVIHRKDIYKHYIG
VDASMADLMRPGIYGAYHHITVMGKEDLPKDHIYDVTGSLCENNDKFAVDRELPRIDIGD
ILVIHDTGAHGHAMGFNYNGKLRHAELLLQGDGSVKLIRRAEILEDYFATLDFSEL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaaaattaccctttaatcaagagcaattgcggaaaattatagcggactat
ggcaccccttttcatatttatgatgaggtagccattcgaaaaaatgcccaaagacttcag
tcggcatttgcctgggcaccggagtttaaggagtattttgccgtcaaagctctccccaat
ccccatattctgaagatccttcgggaagaaggctttggagcagattgcagctctttggct
gagctgattttggcagaaaaggcgggaatcacagaggagaacattatactgacctccaac
aatacccctgcagacgaatttcaaaaagctaaggatttatgggcgatcatcaatttagac
gatattacccatattgattatctggaaaagcatgccggcctgccggaggtgatctccttc
cgttataatcccggtttcctgcgggagggaaatgccattatcggcagccctgaagaatcc
aaatatggcttaactaaggaacaattattccaggcttacgagatcgttcgtgataaagga
gtgaaacgtttcgggcttcatactatgattatctccaatgagctgaaccctgatttcttc
attgagacagcagagatgatgtttgatctggccatagagctgaaagaaaggctgggaatc
cgcctggaatttgtgaattttggcggaggaatcggcatcccctaccgtccggaacaagag
ccggtcaatctggagactatcggtgaaggagtccgtaaagtttacgaagagaagatcgtt
cccaacggcttggatcctttgcgcatttgcttggaatgcgggcgcatggtaacgggacct
tttggctatttggtgacccaggttattcatcgtaaggatatttataaacactatatcggt
gtcgacgccagcatggcggatctgatgcgtccgggaatatacggcgcataccaccatata
accgtcatgggtaaggaagacctgcctaaggaccatatttatgatgtgaccggaagctta
tgtgagaataacgataaatttgccgtggaccgggaactgccccggatcgatatcggggat
atcctggtgattcatgataccggtgctcacggacatgccatgggcttcaactacaatggc
aagctgcgtcatgctgagttattgctgcaaggggacggcagtgtgaagctgatccgccgg
gcggaaatcctagaggattatttcgccaccttggatttcagtgaactatag
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