Dictyostelium discoideum (cellular slime mold): DDB_G0267604
Help
Entry
DDB_G0267604 CDS
T00245
Symbol
mserS
Name
(RefSeq) serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DDB_G0267604 (mserS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddi01007
]
DDB_G0267604 (mserS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddi03016
]
DDB_G0267604 (mserS)
Enzymes [BR:
ddi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
DDB_G0267604 (mserS)
Amino acid related enzymes [BR:
ddi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
DDB_G0267604 (mserS)
Transfer RNA biogenesis [BR:
ddi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DDB_G0267604 (mserS)
Prokaryotic type
DDB_G0267604 (mserS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
8615961
NCBI-ProteinID:
XP_647158
dictyBase:
DDB_G0267604
UniProt:
Q55GM6
LinkDB
All DBs
Position
1:complement(406648..408225)
Genome browser
AA seq
525 aa
AA seq
DB search
MLKLFKNFNQCNNKLNLNSNLLKYYTSKIKQIDQNEINQQQQQQHIIVNQIKPRIDFQFI
KDNENQIKENIIKRKSPVELEKLIKNYDEYRIIKKELDTFRAKRNEIASKMKLMMKGGGE
SNKNDRLELVEQGKQVKEDLIALEEKHDIYFNEITSEALKIPNNTHPSVPIGAESNANII
KMVGEKPNYLKPDEPIKDHLELGESLGVIRSASKTTGHKYYYFTREGAMLEMALSYWAFS
KLTYKYGFQSVITPDLIHPNLAEACGFHARSDADQLFWIKDRDLCLSATSEIPLAGMYAN
EEPLQSAELPIKMVGYSHCFRPEAGRGLQNKGIYRVHQFSKVEMFIISKPHESNEILEEL
LKIQIELFSELGLHFRVLDMPSEDLGAPAYRKYDIEVWIPSKQEYGEISSASNCTDYQSK
RLNIKYQSTKDDFQIQQFVENNYKIIPSPQILNDDNNNNSNNNNEIDNSIPPLFTHTLNG
TACAIPRLILAILENNQQSDGSVLIPKVLQPFMNNQKVILPLNKK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattatttaaaaattttaatcaatgtaataataaattaaatttaaattcaaat
ttattaaaatattatacaagtaaaattaagcaaattgaccaaaatgaaattaatcaacaa
caacagcaacaacatattattgttaatcaaattaaaccaagaattgattttcaatttata
aaagataatgaaaatcaaattaaagaaaatattataaaaagaaaatcaccagttgaatta
gagaaattaattaaaaattatgatgaatatagaattataaagaaagaattggatacattt
agagcaaaaagaaatgaaattgcatcaaagatgaaattaatgatgaaaggtggtggtgaa
agtaataaaaatgatagattggaattagttgaacaaggtaaacaagtgaaagaggattta
atagcattggaagagaaacatgatatatacttcaatgagatcacaagtgaagctttgaaa
ataccaaataatacacacccatcagtgccaataggagcagaatccaatgcaaacattatt
aaaatggttggtgagaaaccaaattatttaaaaccagatgaaccaattaaagatcattta
gagttgggtgagagtttaggagtgattcgatcggcttcaaagaccaccggtcataaatac
tactatttcacaagggagggtgccatgctggaaatggcgttgtcctattgggcattttct
aaactaacttataaatacggatttcagtctgtgataacaccagatttgattcacccaaat
ttggcagaagcttgtgggtttcatgcacgttcagatgctgaccaattgttttggattaag
gatagggatctttgcctatcggcaacttctgaaatcccattagcgggtatgtacgccaat
gaggagccattgcaatctgcagagttgcctattaaaatggtgggctattcacactgtttc
agacccgaggctggcagaggcttgcaaaataagggcatctatagggtacaccagtttagt
aaggttgagatgtttatcatttcaaaaccacacgaatctaatgagattcttgaggaactt
ttaaaaattcaaattgaattattcagtgaattaggtctacatttcagagtgctagatatg
ccatctgaagatttaggtgcaccagcatacagaaaatatgatatagaagtttggatacct
tcaaaacaagaatatggtgaaatcagcagtgcttcaaattgcaccgattatcaaagtaaa
agattaaatataaaatatcaatcaacaaaagatgatttccaaattcaacaatttgttgaa
aataattataaaattattccatcaccacaaattttaaatgatgataataataataatagt
aataataataatgaaattgataattcaataccaccattattcactcatactttaaatggt
acagcttgtgctataccacgtttaattttagccattttagaaaataatcaacaatctgat
ggttcagttttaattccaaaagttttacaaccatttatgaataatcaaaaagttattctc
cctttaaataaaaaataa
DBGET
integrated database retrieval system