Dictyostelium discoideum (cellular slime mold): DDB_G0267982
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Entry
DDB_G0267982 CDS
T00245
Symbol
copA
Name
(RefSeq) WD40 repeat-containing protein
KO
K05236
coatomer subunit alpha
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ddi04131
]
DDB_G0267982 (copA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ddi04147
]
DDB_G0267982 (copA)
Membrane trafficking [BR:
ddi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
DDB_G0267982 (copA)
Exosome [BR:
ddi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DDB_G0267982 (copA)
Exosomal proteins of bladder cancer cells
DDB_G0267982 (copA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SCAP
TPR_COPA_B
Beta-prop_WDR41
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_ACSF4
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
8616271
NCBI-ProteinID:
XP_647464
dictyBase:
DDB_G0267982
UniProt:
Q55FR9
LinkDB
All DBs
Position
1:1232234..1235989
Genome browser
AA seq
1221 aa
AA seq
DB search
MLYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFH
MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIW
NWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDISGLKKKMTTVKPYREN
DPMRLQDELFGTDISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDPIVDT
FRGHYNNVSCALFHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLASHPNQN
LFAAGHDSGMIVFKLERERPLFVQNGDSGVFFLKKKNFNSFDFQAGRTVSLFHISKLPSN
NGTQTMSYNQTERAILVSSDAEGGSYHLYKIPPKDSNTVNTKKGTGVAAIFVGRDRFAVL
DKGNNVVIRDLENEEIKRCQIPFTIDWIYPSGSPGTILIQSEDKIHMFDIQQKKMLCEIQ
VHGVRYVIWSKDRNYVAFLTRDFIVLANKKLEQICMIHETVLPKSGVWDDNGVFIYSTSN
HLKYLLQNGDNGTIRTLESTIYITGVKNNKVFAIDREFKNRIIEIDTTEYVLKLSLLQQN
YNQVMTILRENRLVGKAIIAYLQKKGYPDVVHFVKDDRTRFNLALDAGNIDIALSSAKIL
DDKDCWNRLGVEALKQGNYQVVEMAYSRTSEFDRLSFLYLLVGNLSTLKKMISYESSDIM
SRFHFSLYLGDVEERIKILQEAGLHQLAYITASIHGLTEKAESIGNLITSDGKSQLPQLP
KQSYLLVPPSPINCNPNELNWPLLTTTKSVSDVMGENRFGVEQSTSTPTGDWESDEDIFS
EGKSQQQSSQQQQQQQQKGDWEEDILIGDGNNGGGDDGGWERDDLKGLEKIGTDGFNNKQ
NDHVALFVPPQPGPSFSMIWARNSQFAVDHIAAGSFESAMNILNSQIGAVNFDPIKSMFM
NIFMATRSSLGCNASTPSLLMPIQRKSAAPYITYGLGHLIERLKTNAYKSTTEGKFNDAL
SHFTYILHTIIFCSVDNKQEVNELKDLINICREYILGIKIELQRKELSIGAQKDSTLGRQ
AELAAYFTHCNLDPSHLILSLRSAMNCAYKVKHFNLAASFARRLISLNPNPDLATQAKKV
FNFAQQTPTPSDIQQLNYDERNPFVICAHSYVPIYKGSPLIKCPYCSSCYLPTHKGKVCS
VCQISEIGKDVQGLQVITIQK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgttatacaaattcgaaacaaaagcaagtagagtaaaaggattaagttttcatccaact
cgtccatggattttagcaagtttacattctggttcaattcatttatatgattatcgtatt
aaaacattattagagaaatttgatgaacatgaaggtccagttagaggtattaattttcat
atgacacaaccattatttgtatcaggtggtgatgattataaaattaaagtttggaattat
aaacaacgtagatgtttattcacattaaaaggacataaagattatattagaagtgttgaa
tttcatagagaagcaccatggatagtaagttcaagtgatgatatggtaattcgtatttgg
aattggcaatcacgtacatgtatagcagaattgaatggtcataatcattatgttatgagt
gcattatttcatccaaaggatgatttagtagtttcagcatcattggatcaaaccattcgt
atttgggatatctctggattgaaaaagaaaatgaccaccgttaaaccatatagagagaat
gatccaatgcgtttacaagatgaattatttggaactgatatatcggttagattatcattg
gaaggtcatgatcgtggtgtaaattgggcaagtttccatccaacccaaccatatatcgta
tcggcatcagacgatcatcaagttaaattatggcgtatgaatgacccaatcgtagataca
ttccgtggtcattacaataatgtatcatgtgcactctttcatcctcgtcaagatttaatc
atttccaatagtgaggataagaccattcgtgtttgggatattataaagaaatctaccgtt
catatgattcgtcgtgatcatgaccgtttctggactttggcatctcatccaaatcaaaat
ttattcgctgctggtcacgatagtggtatgattgttttcaagttggagagagaacgtcca
ttgtttgttcaaaatggtgatagtggtgttttctttttaaagaagaaaaatttcaactct
tttgatttccaagctggtcgtactgtttcattattccatatctccaaattaccatcaaac
aatggtactcaaaccatgtcttacaatcaaactgaaagagcaattctcgtctcatcagat
gctgaaggtggttcttatcatctttacaagattccaccaaaagatagtaacactgtaaac
acaaagaaaggtactggtgttgctgcaattttcgttggtcgtgatcgtttcgccgtttta
gataaaggtaacaatgttgtcattagagatttagagaatgaagagattaaacgttgtcaa
attccattcactatcgattggatttatccatctggttcacctggtaccattttaattcaa
tctgaagataaaatccatatgtttgatattcaacaaaagaagatgctctgtgaaattcaa
gtacatggtgtaagatatgtaatttggagtaaggatagaaattatgttgcctttttaaca
cgtgatttcatcgttttagccaataagaaacttgaacaaatttgtatgattcatgaaact
gtacttccaaagagtggtgtttgggatgataatggtgttttcatctatagcacttcaaat
catttgaaatatctcttacaaaatggtgacaatggtacaattagaactttggaatcaaca
atctatatcactggtgtaaagaataataaagtatttgcaattgaccgtgaatttaaaaat
cgtatcattgaaatcgataccacagaatatgttctcaaattatcattacttcaacaaaat
tataatcaagttatgacaatcctcagagagaatcgtttggttggtaaagctatcattgct
tatcttcaaaagaaaggttatccagatgtagttcactttgttaaggatgatcgtactcgt
ttcaatttagcattggatgctggtaatatcgatattgctctctctagtgcaaagatttta
gatgataaagattgttggaatcgtttaggtgtagaagccctaaaacaaggtaattatcaa
gtggttgaaatggcctactctcgtacaagtgaatttgatcgtcttagtttcctctatcta
ttggttggtaatttaagtaccctcaaaaagatgatttcttatgaatctagtgatatcatg
agcagattccatttctcattatatttaggtgacgtagaagaaagaattaaaattcttcaa
gaggcaggtcttcatcaattggcttatattacagcttctattcatggtttaactgaaaag
gctgagtccattggtaatttaatcacttccgatggaaaatctcaattaccacaattacca
aaacaatcttatctcttggtaccaccttcaccaatcaattgtaatccaaatgaattaaat
tggccattacttacaactacaaaatcagtttctgatgttatgggtgaaaatagatttggt
gttgaacaatcaacttcaactccaacaggtgattgggaaagtgatgaagatattttcagt
gaaggtaaatcacaacaacaatcatcacaacaacaacaacaacaacaacaaaaaggtgat
tgggaagaagatattttaattggagatggtaataatggtggtggtgatgatggtggttgg
gaacgtgatgatttgaaaggtttagaaaaaattggtacagatggatttaataataaacaa
aatgatcatgttgcattatttgtaccaccacaaccaggtccatcattctcaatgatttgg
gcaagaaattcacaatttgcagttgatcatattgcagcaggtagttttgaaagtgcaatg
aatattttaaatagtcaaattggtgcagtcaatttcgatccaatcaaatcaatgtttatg
aatatctttatggctactcgttcatcattaggttgtaatgcatcaacaccatcactttta
atgccaattcaaagaaagagtgcagcaccatacattacctatggacttggtcatctcatt
gaacgtttaaagaccaacgcctataaatcaacaaccgaaggtaaattcaatgacgctctt
tctcatttcacttatattcttcatacaatcatcttttgttcagttgataataaacaagaa
gtgaatgaacttaaagatttaattaacatttgtcgtgaatatatcttgggtattaaaatt
gaattacaaagaaaagaactctcaattggtgctcaaaaagattcaacacttggtagacaa
gctgaattggccgcttatttcactcattgtaatttagatccatctcatttaattcttagt
cttcgttccgctatgaattgcgcttacaaagttaaacactttaatttggcagcttcattt
gcacgtcgtctcatctctcttaatccaaatcctgatcttgccactcaagctaaaaaagtt
ttcaactttgctcaacaaactccaaccccatcagatattcaacaattaaactatgatgaa
cgtaatccatttgtaatttgtgctcactcttatgtaccaatctataaaggttctccatta
attaaatgtccatattgttcaagttgttatttaccaactcataaaggtaaagtttgttca
gtttgtcaaatctctgaaattggtaaagatgttcaaggtttacaagttattacaattcaa
aaataa
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integrated database retrieval system
