Dictyostelium discoideum (cellular slime mold): DDB_G0268014
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Entry
DDB_G0268014 CDS
T00245
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH component
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03022
Basal transcription factors
ddi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DDB_G0268014 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
DDB_G0268014 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0268014 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0268014 (gtf2h1)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DDB_G0268014 (gtf2h1)
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DDB_G0268014 (gtf2h1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
BBL5
FTA2
Vps36_ESCRT-II
OSK
Motif
Other DBs
NCBI-GeneID:
8616299
NCBI-ProteinID:
XP_647492
dictyBase:
DDB_G0268014
UniProt:
Q55FP1
LinkDB
All DBs
Position
1:<1308296..>1310389
Genome browser
AA seq
697 aa
AA seq
DB search
MNKFSREAGEVVLLRAITKYSSQQGTLFFTSLRLVWVQSGYSEPSLHLHISEIKNQFIST
PKSAKALLRLSVRDSIKNALQEFVFEFTHPTNARSDLNSFRDKIAATANLTAPTLPVSAS
NGSNTTSPTNGTSPINGTSPTMTGLKVNPDGTITNDPLSSQPAQVEEKAETKYLSKLKQP
SLSEQQIKQRVILLQSNKELRELYEQMVNKDRVISESDFWESRKSMLKNDSTRSEKQHTG
MPSNLLADVRPSSETPNAVHYRFTPTVIHQIFIQHPSVEKAYKANVPLKISEQNFWKKYV
QSKYFYRDRSSANAPPVDDDLFSKYETDEQNKIRILKRKLIDINPLVDLSSTDGFDTDVH
SGYGVLLDQSQDPNKLEKALPLLRKFNRHSALVLGSKDLLTNNSINIEKDQKNLKKTKKD
ENSTSTPTTTTTTTNTTNTTNTTTTTTTNNTTIKDPNLYNGDDEENISVEQMEKILENHK
KLVNQHIIIDDLQEENSQTLTLLKISDQKRYFEGHSTNNILSDKEKSQLIDILDFDYKNW
QPNLPQVFYQTHSSSSILQEPNISVHSEIFEPYNKAAINSKEEYNLPESSFKRDLFQSFH
HCNELLRHFWATTFTLGRGAPPTSQQIDKNNKISSAIALQYDKIEEKKKMLISQNKVNQS
SLFTPILESLHKAIEKKESQTNQYTFKNNNNNFHTIS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttagtagagaagctggagaagttgtattattaagagcaattacaaaatat
tcatcacaacaaggtacattattttttacaagtttaagattagtatgggtacaaagtgga
tatagtgaaccaagtttacatttacatatttcagagattaaaaatcaattcattagtaca
ccaaagagtgctaaagcgttattacgtttatcagtacgtgatagtataaagaatgcactt
caagagtttgtatttgaatttacacatccaaccaatgcaagatcagatctcaatagtttt
agagataaaatagcggcaactgcaaatttaacagcaccaactctaccagtgtcagcctcc
aatggatcaaatacaacctcaccaacaaatggtacatcaccaataaatggtacatcacca
actatgactggtttaaaagtgaatcctgacggtacaattaccaatgacccattatcatca
caaccagcacaagtcgaagaaaaagcggaaactaaatatttatcaaaattaaaacaacca
tcattatcagaacaacaaattaaacaacgtgttatactattacaatctaataaagagttg
agagagctctatgaacaaatggtaaataaagatagagttatcagtgaatctgatttttgg
gaatcacgtaaatcaatgttaaaaaatgactctacaagatcagagaaacaacatactggt
atgccaagtaatctattagcagatgtcagaccatcctctgaaacaccaaatgcagtacac
tatagattcactccaactgtaattcatcaaattttcattcaacatccatcagttgaaaaa
gcatacaaagcaaatgtacccttaaaaatatcagaacaaaacttttggaagaaatatgtt
caatcaaaatacttctatcgtgatcgttcatctgcaaatgcaccaccagttgatgatgat
ctattttcaaagtatgaaactgatgaacaaaataaaattagaattttaaaaagaaaactt
atagatatcaatccattggttgatttatcttcaactgatggttttgatactgatgttcat
agtggctatggtgtattattagatcaatctcaagatccaaataaattagaaaaagcatta
ccattattacgtaaatttaatagacattctgctttagttttaggttcaaaagatttatta
acaaataattcaattaatattgaaaaagatcaaaaaaatttaaaaaaaactaaaaaagat
gaaaattcaacatcaacaccaacaacaacaacaacaacaacaaatactactaatactacc
aatactactactactactactacaaataatactacaataaaagatccaaatttatataat
ggagatgatgaagaaaatataagtgttgaacaaatggaaaaaattttagaaaatcataaa
aaattagtaaatcaacatattataattgatgatttacaagaagagaattctcaaacttta
acacttttaaaaatttcagatcaaaaacgttattttgaaggtcattcaacaaataatatt
ctaagtgataaagagaaatcacaattaattgatatacttgattttgattataaaaattgg
caaccaaatttacctcaagtattttatcaaactcattcatcatcatcaatattacaagaa
ccaaatatatcagttcattcagaaatatttgaaccatataataaagcagctataaattca
aaagaagaatataatttaccagaatcctcatttaagagagatttatttcaatcatttcat
cattgtaatgaattattaagacatttttgggcaacaacttttactttaggtagaggtgct
ccaccaacttcacaacaaatcgataaaaataataaaatatcctctgcaatagctttacaa
tatgataaaattgaagaaaaaaagaaaatgttaattagtcaaaataaagttaaccaatct
tcattattcactccaattttagaatcacttcataaagcaattgaaaagaaagaatctcaa
actaatcaatatacttttaaaaataataataataattttcatacaatttcttaa
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