Dictyostelium discoideum (cellular slime mold): DDB_G0269370
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Entry
DDB_G0269370 CDS
T00245
Name
(RefSeq) NUDIX hydrolase family protein
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DDB_G0269370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0269370
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
DDB_G0269370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
8616854
NCBI-ProteinID:
XP_645913
dictyBase:
DDB_G0269370
UniProt:
Q55E68
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Position
1:<2630812..>2631796
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AA seq
200 aa
AA seq
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MSIKTLTLYNFNTSYSFGKEEKKEKEQSLTSKLARLKDSYEKEGLRKAVEGIIIIHDHGH
PHILLLQDNNYFKLPGGKLKPGENEIDGLIRKLTKKLSPTGTPVSDAPWEIGDHVSTWWR
PNFEPSLFPYIPSHITKPKECKKLFVVTLPEKCKFAVSNNLSLIAVSLYEIYNNSQRYGA
VISSIPALISRYTFVYLNVD
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattaaaacgctaacattatataattttaataccagttattcatttggtaaagag
gagaaaaaagaaaaagaacaatcacttacatcaaaattagcacgtttaaaagattcttat
gaaaaagaaggattaagaaaagcagtagagggtatcattattattcatgatcatggtcat
cctcatatattacttttacaagataataattattttaaattaccgggaggtaaacttaaa
ccaggagaaaatgaaattgatggacttataagaaaattaacaaaaaaactatcaccaaca
ggtactcctgtatcagatgcaccttgggagattggtgatcatgtttcaacatggtggaga
ccaaattttgaaccatccctttttccatatattccttctcatataactaaaccaaaagaa
tgtaaaaaactatttgttgttacccttcctgaaaaatgtaaatttgctgtttcaaataat
ttaagtttaattgctgtgtcactttatgaaatttataataattctcaaagatatggtgct
gtaatttcaagtattcctgcactcattagtagatatactttcgtttatctcaatgtagat
tag
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