Dictyostelium discoideum (cellular slime mold): DDB_G0271122
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Entry
DDB_G0271122 CDS
T00245
Symbol
ufd1
Name
(RefSeq) ubiquitin fusion degradation protein UFD1 family protein
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DDB_G0271122 (ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ddi03009
]
DDB_G0271122 (ufd1)
Ribosome biogenesis [BR:
ddi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DDB_G0271122 (ufd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
8617805
NCBI-ProteinID:
XP_645814
dictyBase:
DDB_G0271122
UniProt:
Q55BK0
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Position
2:complement(33552..34772)
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AA seq
330 aa
AA seq
DB search
MNLDEYVRSLRGEVMGHHHGGPGRYEQKFKAFPISFLPKEKHSLESGGKILLPPSALNAL
SRLNIQYPMLFEISNPISGKKSHCGVLEFIAEEGICYLPLWMMQNLQLKEGEFIDIKNAT
LAKGTFVKIQPRTSNFIDISNPKAVLENSLRKFATLTKDDEIMIDYNNTKYYLKVVELKP
ANAISIIEADVSVDFAPPMDSKEATSPSTSSPGSHVSGPSKGLTFGPASTSAKPIPGGKK
KKDESDSDSDSDDEPKFKAFAGTGARLDGKVGTPLGTSPKTLNTNNNNNNNNNNNNNNNN
NNNNNSNNNNTKNEDTKFKSFSGKGHSLKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgatgaatatgtaagatcattaagaggtgaagtaatgggtcatcatcatggg
ggtccaggaagatacgaacaaaagtttaaagctttcccaattagtttcttaccaaaagaa
aaacattctttagaatctggtggtaaaatattattaccaccaagtgcattaaatgcctta
agtaggttaaatattcaatatccaatgttatttgaaatttcaaatccaattagtggtaaa
aaatcacattgtggtgtacttgaatttattgcagaagaaggtatttgttatttaccatta
tggatgatgcaaaatcttcaattaaaagaaggtgaatttattgatattaaaaatgcgaca
ttagcaaaaggtacatttgtaaaaattcaaccacgtacatcaaattttatagatatttca
aatccaaaagcagttttggagaattcactaagaaagtttgcaacattaacaaaagatgat
gaaattatgattgattacaataatacaaaatattacttaaaagtagttgaattaaaacca
gccaatgcaatttcaattattgaagcagatgtttctgttgattttgcaccaccaatggat
tcaaaagaagctacatcaccatcaacttcatcaccaggttcacatgttagtggaccatca
aaaggtttaacatttggacctgcttcaacatctgctaaaccaattcctggaggtaaaaag
aaaaaagatgaatccgatagcgatagtgattctgatgatgaaccaaaattcaaagctttt
gctggtacaggtgcaagattggatggtaaggttggtactcctttaggtacaagtccaaaa
actttaaatacaaataataataataataataataataataataacaataataataataat
aataataataataattcaaataataataatacaaagaatgaagatacaaaatttaaatca
ttttctggtaaaggtcatagtttaaaagattaa
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