Dictyostelium discoideum (cellular slime mold): DDB_G0271788
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Entry
DDB_G0271788 CDS
T00245
Symbol
wdr57
Name
(RefSeq) WD40 repeat-containing protein
KO
K12857
Prp8 binding protein
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DDB_G0271788 (wdr57)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0271788 (wdr57)
Spliceosome [BR:
ddi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
DDB_G0271788 (wdr57)
Complex C
U5 SnRNP specific factors
DDB_G0271788 (wdr57)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_NWD2_C
PEP5_VPS11_N
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
8618082
NCBI-ProteinID:
XP_645454
dictyBase:
DDB_G0271788
UniProt:
Q55AR8
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All DBs
Position
2:716526..717712
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AA seq
355 aa
AA seq
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MENKRKQKDEIVLVNGSNDTTPNKKQKNELQVVSSGGGREIILGTERTSKLEHPIMQLIG
HKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEI
YTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSK
GSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSV
SKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCG
SSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEIKP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaggaaacaaaaagatgaaatagttttagtaaatggatcaaatgataca
acaccaaataaaaaacaaaaaaatgaactacaggtagtatcaagtggtggaggtagagag
attatattaggtacagaaagaacatcaaaactagaacacccaattatgcaattaataggt
cataaaggtgaaatctattcttgcaaatttaattcatatggtacagctctagctagtggt
ggttctgataaagaaatttttttatggaatgtatatggtgaatgtataaattattcagtt
ttaaaaggtcataaaggtacaatattagaattacattggtcaacagattcaaatgaaata
tatacagcatgtacagataaatcaattggtgtttgggattcaaataaaggtgaattaata
aagaggataagggaacatagtggtgttgtaaattcatgttgtccagcaagaagaggacca
ccattggtggcatcgggatccgatgatagaagtgcgagaattttcgacactcgttcaaag
ggaagcactcacttatttcaacataaatatccagtcactagtgtttgtttctctgatgca
tcggatcaattgatcactggtggaattgataatgttattagggtttgggatatacgtaat
caagaggaccctttgtatacattggcaagtcatcaagacacaatcacatcgacatcggtt
agtaaggatggtgcttatctattatcgaattcaatggataacagttgtaaaatttgggat
attagaccgtatgccccacccaatagaaatataaaaacatttaatggtgctcaaaataac
tttgaaaagaatttaattaaatcatcttggtcaattgatggtagaagaattggttgtggt
tcttctgatcgtcaagtttacatttgggatacaaatactaaacaattacaatactgttta
cctggtcattctggtactgttaatgaagtaacttttcatccaaatgaaccaattatagct
tcttgttcttcagataaaacaatttatttaggagaaattaaaccataa
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