Dictyostelium discoideum (cellular slime mold): DDB_G0272056
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Entry
DDB_G0272056 CDS
T00245
Name
(RefSeq) NOT2/NOT3/NOT5 family protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDB_G0272056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ddi03019
]
DDB_G0272056
Messenger RNA biogenesis [BR:
ddi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DDB_G0272056
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DDB_G0272056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8618247
NCBI-ProteinID:
XP_645358
dictyBase:
DDB_G0272056
UniProt:
Q55AA8
LinkDB
All DBs
Position
2:1115108..1118319
Genome browser
AA seq
866 aa
AA seq
DB search
MNTRKLQGEIDKTLKKVADGIIEFDCVLKKVYSAISTNQKEKYESDLKKEIKKLQRYRDQ
IKAWIASNDVKNKAALLESRKSIEMILINFKKNKIKKMDSFRHLERGEGKGKYSKDGGVD
SSTKDEMAKTHVKTWASKAIATLRAQLESFDTELENIPVRKRKTESARVEQLQKFKNNHK
YHLLALEFLLRMMDDDRIPTDEIEKIKDSVECYIDSYTQEDTYEEPGEIYSIFNFKPHNI
TDIEDEDFDFSLDEESDDDDDDDDYSDASDHDDDDDESSSKKDSNSENEDEIKETPKVAT
ATATATAEKSTQPIISTSIQQQLPQPNKSPILQPNNTARIGSPTPTTNLSQQTQPTKAST
PSPTFSSVTKTSIKNDNKQSHSQPTPVTIPNQQFPSLGNVPMAQRLMQQQAQQQAAAAAQ
LAAQQAQTQQTQQQQQQQQQQQQQQQQQQQQQQQQQNQQQQAPPQQQQAPQQQQQQNTQF
KNKTGQSDINDVQDSLSQLNIKQQQQPPQQPQQQQQQQQQQQQQQQQQQQQQPQADLDDS
KNNETFDNSSNLYPGTLAEISTISRINDGTYQQQHQQQQQQQSHQQSHQQSHQQSQQQSQ
QSQHHHQQQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQPQQQQPQHQSQQHQPQPQQPQ
QPQQPQHQPYHQQQSYQQQQQQQQQQYQQQQQQQQQQYQQQQMSQNQNQNQSQQQQQSGQ
LGFEEAMILTRHMMDISFKNLPDFKDYERIPTFIPRNPKPVPQYYPQSTLPLFESPNVFE
KFDIDTLFFIFYFKQGTYQQYQAAKELKKQGWRYHKKYLTWFRRHEEPKEITNEFEQGTY
VYFDYETGWCQRKKTEFTFEYRFLEE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgaatacaagaaaacttcaaggagaaattgataaaacgttaaaaaaagtagcagatggt
ataatagagtttgattgcgttttaaaaaaggtttactctgcaataagtacaaatcaaaaa
gagaaatatgaaagtgatttaaaaaaagaaattaaaaaacttcaaagatatagagatcaa
attaaagcatggatcgcctcaaacgatgtaaaaaataaagctgcattattagaatctaga
aaatcaatagaaatgattttaataaactttaaaaaaaataaaataaagaagatggattca
tttagacatttagaaagaggtgaaggtaaaggtaaatattcaaaagatggtggagttgat
tcatcgacaaaggatgagatggcaaaaactcatgtaaaaacttgggcaagtaaagcaatt
gcaacattaagagctcaattggaatcattcgatacggaattggagaatataccagttaga
aagagaaaaacggaatcggcacgtgttgaacaattacaaaagtttaaaaataatcataaa
tatcatttattagcattggaattcctattgagaatgatggatgatgatcgtattccaacc
gatgaaattgaaaagattaaagactctgtagaatgttatatcgatagttatacccaagag
gacacctacgaagaacccggtgaaatctattcaatctttaattttaaacctcacaacatc
accgatatagaagatgaagatttcgatttctcattagatgaagaatctgatgacgacgat
gatgatgatgattattccgatgcttctgatcatgatgatgacgatgatgaaagttcttca
aaaaaagattcaaattctgaaaatgaagatgaaattaaagaaacaccaaaagtggcaaca
gcaacagcaacagcaacagcagaaaaatcaactcaaccaattatatcaacgtcgatacaa
caacaattaccacaaccaaataaatcaccaattttacaaccaaataatactgcgagaata
gggtcaccaactccaactacaaatttatctcaacaaactcaaccaacaaaggcatcaact
ccatcaccaactttttcatctgttacaaaaacttcaattaagaatgataataaacaatca
cattcacaaccaacacctgtaacaataccaaatcaacaattcccgtcattaggtaatgta
ccaatggctcaaagattaatgcaacaacaagcacaacaacaggctgctgctgctgctcaa
ttggctgcacaacaggctcaaactcaacaaacacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaaaatcaacaacaa
caagcaccaccacaacaacaacaagcaccacaacaacaacaacaacaaaatacacaattt
aaaaacaaaacgggacaatcagatattaatgatgttcaagattcattatcacaacttaat
attaaacaacaacaacaaccaccacaacaaccacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacagccacaagcagatttggatgatagt
aaaaataatgaaacctttgataactcctcaaatctttatccaggtactttagcagaaata
tcgacaatatctagaatcaatgatggaacttatcaacaacaacatcaacaacaacaacaa
caacaatctcatcaacaatcccatcaacaatctcatcaacaatctcaacaacaatcacaa
caatctcaacatcaccatcaacaacaaccacaaccacaaccacaaccacaaccacaacca
caaccacaaccacaaccacaaccacaaccacaaccacaaccacaaccacaaccacaacca
caacaacaacaaccacaacaccaatcacaacaacaccaaccacaaccacaacaaccacaa
caaccacaacaaccacaacaccaaccatatcatcaacaacaatcataccaacaacaacaa
caacaacaacaacaacaatatcaacaacagcaacaacagcaacaacaacaatatcaacaa
caacaaatgtcacaaaatcaaaatcaaaatcaatcacaacaacaacaacaatcaggtcaa
ttaggatttgaagaagcaatgatactaacaagacatatgatggatataagttttaaaaat
ctaccagattttaaagattacgaaagaataccaacatttatacccagaaatccaaaacct
gtaccacaatattatccacaatcaactttaccattatttgaatcaccaaacgtttttgag
aaatttgatatcgataccttgtttttcattttctatttcaaacaaggaacttatcaacaa
tatcaagcagctaaagaattaaagaaacaaggttggagatatcataaaaaatatctcacc
tggtttagaagacatgaagaaccaaaagaaatcacaaatgaattcgaacaaggtacctat
gtttattttgattatgaaactggttggtgtcaaagaaagaaaacagagttcacttttgaa
tatagatttttagaagagtaa
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