Dictyostelium discoideum (cellular slime mold): DDB_G0272354
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Entry
DDB_G0272354 CDS
T00245
Symbol
spt6
Name
(RefSeq) SH2 domain-containing protein
KO
K11292
transcription elongation factor SPT6
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0272354 (spt6)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0272354 (spt6)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DDB_G0272354 (spt6)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
DDB_G0272354 (spt6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
Spt6_S1
HTH_44
Tex_central_region
HHH_9
SH2
Motif
Other DBs
NCBI-GeneID:
8618306
NCBI-ProteinID:
XP_645136
dictyBase:
DDB_G0272354
UniProt:
Q55A48
LinkDB
All DBs
Position
2
Genome browser
AA seq
1754 aa
AA seq
DB search
MSSKNYSDDEIENEENIHPKKKFKNLNKNKDDESSELEEYHDSSEEDENEPNQYQYDDFV
VGGDDDERRKRKKKEKRKKSSSNSDNEDDNEEEEEEDRGGGGGSGSGGSGGSGGRNSSSP
KRTNNHLDEDIDGDEDGDDGSDGSESESESEEDEEVAQARRERRRKRREERRKREKGGLQ
RLKKLRASNKDLSDKEDDVEDGYNGEQEDDGFVVDSHGKPVKRSHERERMSYESSNRSRI
MSDIFDDDEEEGYGSGEEEEDSGINKTEADRAKDRLAAIREQYEPSLLEEKHFTDADEEI
RNKNVPERLQSRKGTQYAGEMACEEEAEWIYEVAFEQRDFQQQQQRNPNTEPVRDAKAIT
AIFKILQFIQRDLLEIPFIYTYEKDIYEPYFTLQELWNIFDLDEKWAHMKVNKRNLEQIG
SNNQQLEPYKSVLLESRSEESISDLYDLFQMINGIQKNTNLLNGSSSLGSGGDGYDDKEG
GSSATQGNTVGGLSRQKKAIKRDLYTIYTKAGLSKFLPNFGMTAQEFGQNLMDNYTTNKP
RDQMAEPSTMALVHICLEADNKDRVLQATRYMMAQEIGYDPHVRYSVRMIYRKYAHITTT
PTLKGFKEIDVFHPYFTVKSIQEKPAHLFEDSQYLLILKAEKEGFIKSTMAITEKTHNSV
IIPEMESLYLSDGTSAITQQWNEQRKLIIREALNKFLYPVLEKELRNKLLTEASNRVAFE
CAKKLEDKIRVAPWRPVSSSSGIGHSNSSVLFGGSRANNGYSNDDDEDEDDDEEVDYDRD
GNPIPFKILSLCWGSDKIPTMGAVLNSDGEVLSHIKLDFICDRLGESLKEKKEKDIKRLE
EICQEYQPRLVLVSATEMDSKRLYEEVKDHLQRWSNGERRIIRKSVLLNYYSPEIGLSLQ
TSSRLQEEFKEYPPILRHTIAVGRCALDPITEYASLCNDHNEILFLKLHPLQDMIGKDYL
VKLLHRCFINVVNAVGVDINRMIQCRFTSATLQFVSGLGSRKAQMLLNSLFRRGGFVTSR
QSLEKVLSQDVIYRNCIGFIQIRERHAADYKADLLDDTRIHPTSYPITYRIAAEALDKNL
DERNFHSYIEDIIKRPKKLDRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFADIRHP
YEEPSADTIFEWLTGETNQSLRRGTLVTVTTIRTFDNSVKCRLDNGLEGSIPTDCISDNG
ETKSLGRGVTINCRVMGVDKYQFTVSLSCKPSDLNPSFWEETIFRELKENGANQYLRLEE
VAPPVEQTKRKPKRERRIKRTVVHPLWHDFSCLEAETYLSDKPIGDVLLRPSSKGHDHIT
ATFKFADSIFLHHDIKEADKPNAVSLGKSFYMGDVKYDSLDEILARHVEYLINNLNEVKS
NTAHWKDGNRSDVDDLIREEKKKNPKTIPYYFGYDFEHPGFLTLYHVPSNTPRHEPVLVK
ADGFILRKKLYPTYYELIKYFKRNYAQLLQPGSSSSSSSGSSSNNNNNNTSNQRLPSNTS
SRSVSNNNNNNIKNSSNNSNNNSNNNNNMSQQRSQHQQFQQSTQQPPQRPQHQQQQPNQY
QQQQPNQYQQPPPQSVYQQQPQPNQPYGQMPQQQPYSQGRPPYQQPPQQQQQQQQPYQQQ
PPQQQQPQQQQQQYNPYQQQQPPQRPQSWNDNQYQQQQPQQYQQRPPQQQPYGQMPPQQQ
YQQQQQYNRPPNQWGPPQQQQQGPYGQQQQPYGQMPQQPQQQQQFNRPPNQPWNVPPQQQ
NQWGQNNNNNSSWD
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaaaattatagtgatgatgaaattgaaaatgaagaaaatattcatccaaaa
aagaaattcaagaatttaaataaaaataaagatgatgaatcatcagaactagaggaatat
catgatagtagtgaggaggatgaaaatgaaccaaatcagtatcaatatgatgatttcgtg
gttggtggtgatgacgatgaacgtcgaaaaagaaagaaaaaagaaaaaagaaagaaatca
tcatcaaatagcgataatgaagatgataatgaagaagaagaggaggaggatcgtggtggt
ggtggtggtagtggtagtggaggtagtggtggtagtggtggccgtaatagtagtagccca
aaacgaaccaataatcatcttgatgaagatattgatggtgatgaagatggtgatgatgga
tcagatggaagtgaatctgaatctgaatctgaagaggacgaagaagttgcacaagctaga
agagaaagaagaagaaaaagacgtgaagagagaagaaaacgtgaaaaaggtggtttacaa
cgtttaaagaaattaagagcttcaaataaagatttatcagataaagaagatgatgtagag
gatggatataatggtgaacaagaggatgatggatttgtagttgattcacatggtaaacca
gtaaagaggagtcatgagcgtgaacgtatgagctatgagagttctaatcgttctagaatt
atgagtgatattttcgatgatgatgaggaagaaggatatggtagtggagaggaagaggag
gattcaggtataaataaaaccgaagctgatagagccaaggatagattagcagcgatcaga
gaacaatacgaaccatcattattggaagagaaacattttacagatgctgatgaggaaatt
cgtaataagaatgtaccagagagattacaaagtagaaagggtacacaatatgcaggtgag
atggcttgtgaagaagaagctgaatggatttatgaagttgcatttgaacaacgtgatttc
caacaacagcaacaaagaaatccaaatactgaacctgttagagacgcaaaggcaatcaca
gcgatctttaagatattacaattcattcaacgtgatctcttggagataccattcatctac
acctatgaaaaggacatctatgaaccttatttcacccttcaagaactttggaatatattt
gatctcgacgagaaatgggctcatatgaaggtgaataaaagaaatttagagcaaatcggt
tcaaacaatcaacaattggagccttataaatcggttctattggagagtcgttccgaagag
agtatctctgatctttatgatctttttcaaatgataaatggtattcaaaagaatactaat
cttttaaatggtagttcatcattaggcagtggtggcgatggttatgatgataaagagggt
ggtagtagtgcaactcaaggtaatacagttggtggtttaagtagacaaaagaaagcaatc
aagagagatctttatacaatttatactaaagcagggttatcaaaatttttaccaaatttt
ggtatgacagcacaagaatttggtcaaaatttaatggataattatacaaccaacaaacct
agagaccaaatggcagaaccatcgacaatggcattggttcacatttgtttggaggctgat
aataaagatcgtgttttacaagcaactcgttatatgatggcacaagagattggatatgat
ccacatgtacgttactcggttagaatgatctatagaaagtatgcacatattacaaccaca
cccactttgaaagggttcaaagagattgatgttttccatccttatttcacagtgaaaagt
attcaagagaaaccagctcatctctttgaagactctcaatatcttttgattctcaaagca
gagaaggaaggtttcatcaaatccactatggcaatcaccgagaaaactcataattccgtc
atcattccagagatggaatcattgtatctaagtgatggtacatcagcaatcactcaacaa
tggaatgaacaaagaaaacttatcattcgtgaagcattaaataaattcctttatccagtt
ttagagaaagaattaagaaataaattattaaccgaagcaagtaatcgtgtggcttttgaa
tgtgcaaagaaattggaagacaaaattcgtgttgcaccttggagaccagtttcttcgtct
agtggtattggtcattcaaattcaagtgtactatttggtggttcaagagcaaataacggt
tatagtaatgatgatgacgaagatgaagatgatgatgaagaagttgattacgatagagat
ggtaatccaataccatttaaaattttatcactttgttggggttcagataaaattccaact
atgggtgcagttttaaattcagatggtgaagtattgtcacatattaaattggatttcatt
tgtgatcgtttaggtgagtcattaaaagagaagaaagaaaaggatataaagagattggag
gagatttgtcaagagtatcaaccacgtttggtgttggtaagtgcaacagagatggatagt
aaacgtctctatgaagaggtgaaagatcatcttcaacgttggtccaatggtgagagacgt
atcattagaaagagtgtactcttgaattattatagtccagagattggtttatcattacaa
acctcatcaagattacaagaagagtttaaagagtatccaccaattcttagacacacaatt
gctgtgggtcgttgtgcattggatccaatcacagagtatgcatcattgtgcaacgatcat
aacgagatcctattcctaaagttacatccacttcaagatatgattggtaaggattatttg
gtgaaattattacatcgttgtttcattaatgtcgtcaatgcagtgggtgtagatatcaat
cgtatgattcaatgtagattcacatcggctactttacaatttgtcagtggtttgggttca
agaaaggctcaaatgttattaaattctttattccgtcgtggtggttttgtcactagcaga
caatcattggagaaggtgttgagtcaagatgtcatctatagaaattgtattggtttcatt
caaattcgtgaaagacatgcagcagactataaagctgatctattggatgacacaagaatt
catccaacctcttatccaatcacttatcgtatcgcagccgaagcattggataagaattta
gatgaaagaaatttccattcctacattgaagatatcataaagagaccaaagaaattggat
cgtttagatttggatggttttgctgatatcatcgagtcacatgaggatcgtccagctaga
aagttattatatttcataaagaaagagttgacaaatccattcgccgatattagacatcca
tatgaagagccatcggccgatacaatctttgaatggttaacaggtgaaaccaatcaatca
ttaagaagaggtaccctcgtaactgtaaccactattcgtacctttgataattcagtcaaa
tgtagattggataatggtttagaaggttccattccaaccgattgtatcagtgacaatggg
gaaactaaatctttaggtagaggtgtcactatcaattgtagagtgatgggtgttgataaa
tatcaattcaccgtttcattatcttgtaaaccatcggatcttaatccaagtttctgggag
gaaactattttccgtgaattgaaagagaatggtgctaatcaatatttacgtcttgaagag
gttgctccaccagtagaacaaacaaagagaaaaccaaagagagaaagaagaataaaaaga
accgtggttcatccattatggcatgactttagttgtttagaggctgaaacctatttaagt
gataaaccaattggtgatgttttattacgtccatcaagtaaaggtcatgatcatatcact
gctaccttcaaatttgccgatagtatattcttacatcatgacattaaagaagccgataaa
ccaaatgcagtaagtttaggtaaatctttctatatgggtgatgtaaaatatgattcattg
gatgaaatcttggctagacatgtagaatatttaataaacaatctcaatgaagtcaaatca
aatactgcccattggaaggatggtaatcgttcagatgttgatgatctaattagagaagaa
aagaaaaagaatccaaaaacgattccttattatttcggttatgatttcgaacatccaggt
ttccttacactctatcatgtaccttcaaatactccaagacatgaacctgttttagttaaa
gctgatggctttatcttaagaaaaaaactttatccaacttattatgaattaattaaatat
tttaaaagaaattatgctcaattattacaaccaggtagtagtagtagtagtagtagtggt
tcatcaagtaataataataataataatacatcaaatcaaagattaccttcaaatacttct
tcacgttctgtttcaaataataataataataatattaaaaatagtagtaataattctaat
aataattctaataataataataatatgtctcaacaaagatcacaacatcaacaattccaa
caatcaactcaacaaccaccacaaagacctcaacatcaacaacaacaaccaaatcaatat
caacaacaacaaccaaatcaatatcaacaaccaccacctcaatcagtttaccaacaacaa
ccacaaccaaaccaaccatatgggcaaatgccacaacaacaaccatactctcaaggtaga
ccaccttatcaacaaccaccacaacaacaacaacaacaacaacagccatatcaacaacaa
ccaccacaacaacagcaaccacaacaacaacaacaacaatataatccatatcaacaacaa
caaccaccacaaagaccacaaagttggaacgacaatcaataccaacaacaacaaccacaa
caatatcaacaaagaccaccacaacaacaaccatatggacaaatgccaccacaacaacaa
tatcagcaacaacaacaatataacagacctccaaatcaatggggtccaccacaacaacaa
caacaaggaccatatggccaacaacaacaaccatatggccaaatgccacaacaaccacaa
caacaacaacaatttaacagaccaccaaatcaaccatggaatgtaccaccacaacaacaa
aatcaatggggtcaaaataacaataacaatagttcttgggattaa
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integrated database retrieval system
