Dictyostelium discoideum (cellular slime mold): DDB_G0272384
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Entry
DDB_G0272384 CDS
T00245
Name
(RefSeq) ATP-dependent DNA helicase RecQ family protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440
Homologous recombination
ddi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDB_G0272384
03460 Fanconi anemia pathway
DDB_G0272384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ddi03032
]
DDB_G0272384
03400 DNA repair and recombination proteins [BR:
ddi03400
]
DDB_G0272384
Enzymes [BR:
ddi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DDB_G0272384
DNA replication proteins [BR:
ddi03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
DDB_G0272384
DNA repair and recombination proteins [BR:
ddi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
DDB_G0272384
Bloom's syndrome complex (BTR)
DDB_G0272384
FA (Fanconi anemia) pathway
DDB_G0272384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
8618350
NCBI-ProteinID:
XP_645178
dictyBase:
DDB_G0272384
UniProt:
Q55A06
LinkDB
All DBs
Position
2:1405577..1408869
Genome browser
AA seq
973 aa
AA seq
DB search
MDNRPMNKLISRSIFNKTNERSTLSLFQSLNYYYKRDFTSEINKTNNNFDNCQNNEEGYN
VINNNKKNKNNSNNNNVEYNENDNSNNNNNNNKNEINNNEIDFDWSMKAKKKIKKSVLTG
EDRLDKKTKDLKYLNSIGLLVKLKSTTISNNEISDNSNNNNLKDKENDEIETIALIDEDN
EISTIKKKKKIKTNKNSYDDDNIDNESNDYTTTIIQNEDHNTFSSTTTTTRGSIKNKRNK
SLKKEEIQKQHEENQDNNHDKISIEYDENELKKTYNLDENGDNIVEMSPAFKNNNLLIKK
SKNKKTKQSNIDIDNDNDNVDNYIDNDDDDETIDKPKKSKSKSTTKSKKINVKKQDDENE
EEEEDEDEEKEFKSIEISKLKKKKKEIKDGEYLNIKNVYKEWLESPIVIKLSNDDSCFTN
SKIKINPKSFTIKSDDDDDGNGNGNGNGNDNDKNNLKLKREWHELVETCNRDIFGNKEFR
NLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDHRGVTFVISPLLALMQDQVHKLK
SLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYITPERLAQSEFLHLLDQLYDQGR
LRRLVVDEAHCISEWGHSFRPKYRLISTFRDRFPSVPISAFTASATPNVEIDIKNSLKMV
NPITINSSFLRPNLLYQVRQKQSDEESLLKDIYNFISFKYPNSTGIIYCATVRECEIVAD
YLSERGLSSNFYHAKLSNTQRSKLQKDWTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMP
QSMESYYQQTGRAGRDGKHSDCLLFYNKSDLMRFKHIISLNQPKDPFNAFSNYNGVGIGD
IGGEHLILDNDGNYISNYSSDESQYMDTIKNKIQQTSTKLEMLDSVASFCSTQSKCRRVT
LLNYFGENSKSCGNMCDICISNSNSNSNNRSKAKQNQIDYSERIYNRNSYSISSFKNKKK
KSHVSYDNDNDVD
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggataatcgacctatgaataaattaattagtaggtctatatttaacaaaacaaatgaa
agatccacattatctttatttcaatcgttaaattattattataaaagagatttcacatct
gaaattaataaaaccaataataatttcgacaattgtcaaaataacgaagaaggttacaat
gtcattaataataataaaaaaaataaaaacaatagtaataataacaatgtagaatataat
gaaaatgataatagtaataataataataataataataaaaatgaaattaataataatgaa
attgattttgattggtcaatgaaagctaaaaaaaaaattaaaaaaagtgtattaactggt
gaagatagattagataaaaaaacaaaagatttaaaatatttaaattcaattggtctatta
gtcaaattaaaatcaactacaatatcaaataatgaaatatcagataatagtaataataat
aatttaaaagataaagaaaatgatgaaattgaaactatagctcttattgatgaagataat
gaaatatcaacaattaaaaagaaaaaaaaaataaagactaataaaaatagttatgatgat
gataatattgacaatgaatcaaatgattatacaactactataatacaaaatgaagatcat
aatacttttagttcaacaactactactactagaggtagtataaaaaataaaagaaataaa
tcattaaaaaaagaagaaattcaaaaacaacatgaagaaaatcaagataataatcatgat
aaaatatcaattgaatacgatgaaaatgaattaaaaaaaacatacaatttagatgaaaat
ggtgataatattgttgaaatgagtcccgcttttaaaaataataatttattaataaagaaa
tctaaaaataaaaaaactaaacaatcaaatattgacattgacaatgacaatgacaatgtt
gataactatattgacaatgatgatgatgatgaaaccattgacaaacctaaaaaatcaaaa
tcaaaatcaacaactaaaagtaagaaaataaatgtaaagaaacaagatgatgaaaatgaa
gaagaggaggaggatgaagatgaagaaaaagaatttaaaagtattgaaattagtaaatta
aaaaaaaagaaaaaagaaattaaagacggagaatatttaaatattaaaaatgtatataaa
gaatggttagaatcaccaattgttattaaattatcaaatgatgatagttgttttacaaat
tctaaaattaaaattaatccaaaatcatttacaattaaaagtgatgatgacgatgatggt
aatggtaatggtaatggtaatggtaatgataatgataagaataatttaaaattaaagaga
gaatggcatgaattagttgaaacatgtaatagagatatatttggtaataaagaatttaga
aatttacaaattgaagctataaattcaattttacatgatagggatacatttgtaagttta
ccaactggtggcggtaagagtttgtgttttcaaattccatcaatcgttgatcatagaggt
gtgacatttgtaatatcaccattgttggcattgatgcaggatcaagtgcacaaattgaaa
tcattgggtattcccgcagagtcaatcaatagttcgggtagtcagcgtgagaatagggat
gttttagaccaattattaaatggtgaaacttgtaaattgaaattaatttatattacacct
gaaagattggcacaatctgaattcttgcatttgttagaccaattgtacgaccaaggtagg
ttgagaagattagtggtggacgaagctcattgtatctctgaatggggccacagtttcagg
ccaaagtacagactaatttccacatttcgtgatcgattcccctctgtaccgatatcggca
ttcactgctagtgcaacgccaaatgttgaaattgatattaaaaactcactaaaaatggtt
aacccaattacaatcaattcaagttttctccgaccaaatttactataccaagttagacaa
aagcaatctgatgaagaatcattactaaaggatatttacaatttcattagttttaaatac
ccaaattcaactggtatcatctattgtgcaaccgttagagaatgtgaaattgttgcagac
tatctaagtgaacgtggtttatcatctaatttttatcatgctaaactcagtaatactcaa
cgttcgaaattacaaaaagattggaccaatggtgaatttaaaatagtttgtacaacaatt
gcatttggtatgggtattgataaaggtgatacaagattcgtcattcatcattcaatgcct
caatcaatggaatcctattatcaacaaactggtagagctggtagagatggtaaacatagt
gattgtttattattttataataaatctgatttaatgagatttaaacatataatatctctt
aatcaaccaaaagatccattcaatgcttttagtaattataatggtgttggtattggtgat
attggtggtgaacatttaatattagataatgatggtaattatattagcaattattcatca
gatgaatctcaatatatggatactattaaaaataaaattcaacaaacatccacaaaactt
gaaatgttggacagtgttgcttcattttgctcaactcaatcgaaatgtcgtcgtgtaact
ttattaaattattttggtgaaaactcaaaatcttgtggaaatatgtgtgatatttgtatt
tcaaattcaaattcaaattcaaataatagatcaaaagcaaaacaaaatcaaatcgattac
tctgaaagaatttataatagaaattcttattcaatttcatcttttaaaaataaaaaaaag
aaatcacatgtatcttatgataatgataatgatgttgattaa
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